| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315724
Identifier: 158315724
GI number: 158315724
Start: 4704898
End: 4705086
Strand: Reverse
Name: 158315724
Synonym: Franean1_3936
Alternate gene names: NA
Gene position: 4705086-4704898 (Counterclockwise)
Preceding gene: 158315725
Following gene: 158315722
Centisome position: 52.38
GC content: 67.2
Gene sequence:
>189_bases ATGAAAGTCACCGTTGACGCCGACGGCTGCTGCGGGCATTCCACCTGCTGCACGCTGTGCCCCGAGGTCTTCACCCTCAG CGACGACGGCTACGCGGTGGTCGAGGTCGACGAGGTCCCCGCGGAGTTCGAGAAGGCTGTGCGGGAGGCCGTCGCGAACT GCCCCGAACGGGCCATCACCGCAAGCTGA
Upstream 100 bases:
>100_bases GCCCCGCGGACGACCGCCGGTACAGCTACCTGCCCACCTTCATCCTGCGTGGGCTGACGCACCTCAACCTCGAGTTCACC CTCGCAGAGAGCAAGACGCC
Downstream 100 bases:
>100_bases CGTCACGCCGGGCCGGCGGTCTCGCCGCGGGCCCGGCGCTCGTCCGCTCACCGCGGGTCGAGGTCGCGGGCGGTCAGCGC CCGGCCAGGCAGCGAGGCGT
Product: ferredoxin 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MKVTVDADGCCGHSTCCTLCPEVFTLSDDGYAVVEVDEVPAEFEKAVREAVANCPERAITAS
Sequences:
>Translated_62_residues MKVTVDADGCCGHSTCCTLCPEVFTLSDDGYAVVEVDEVPAEFEKAVREAVANCPERAITAS >Mature_62_residues MKVTVDADGCCGHSTCCTLCPEVFTLSDDGYAVVEVDEVPAEFEKAVREAVANCPERAITAS
Specific function: Unknown
COG id: COG1141
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6554; Mature: 6554
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 9.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 11.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTVDADGCCGHSTCCTLCPEVFTLSDDGYAVVEVDEVPAEFEKAVREAVANCPERAIT CEEECCCCCCCCCCHHHHHCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC AS CC >Mature Secondary Structure MKVTVDADGCCGHSTCCTLCPEVFTLSDDGYAVVEVDEVPAEFEKAVREAVANCPERAIT CEEECCCCCCCCCCHHHHHCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCC AS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA