Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315699

Identifier: 158315699

GI number: 158315699

Start: 4676888

End: 4677661

Strand: Reverse

Name: 158315699

Synonym: Franean1_3911

Alternate gene names: NA

Gene position: 4677661-4676888 (Counterclockwise)

Preceding gene: 158315702

Following gene: 158315698

Centisome position: 52.08

GC content: 73.39

Gene sequence:

>774_bases
ATGACATCGGAACCGAGAGTCGAGCTGGCGCTGACGCCCGACTCGCGCTGGGACGTCGACACAGCCGGCCTCGTGGCGGC
GGCCGCGGGCGCCGGGTTCGGGTCGGTCGGGCTCGCCGAGGCCAACGCCGACGCGGCCGGAGCGGCCGTCCTCGCCGCGG
CGGGCCTGCGCTGCCACGAGATCCTGGCCCTGATCGTGACCGACGACGAGCAGGCCACGATCGACCAGGCTCGCCGGGTC
GCGAAGGCCGCGGCCGCGGTGAACGCCCGGTGGGTCCTGACCGGCTTCCGGGTGGGGCTCGACGAGCGGAGCGGCCCGTT
GATCGCCCGGTGCGCCGCGCTGTTCGCCGCCGCCGGTGCCGGGATGGCGGTGGAGTTCAGCCCGCTGGGCGGCACGAAGT
CGATCGCCACCGCCGTGGACATCGTGGAGGCCGCCGGCCCCGACCGCGCGGGCGTGCTGATCGACACGTGGCATTTCTTC
AACGGGGAGAGCACCTGGGAGCAGCTCGAGCAGGTGCCCCTGGACCGCATCGCCTACGTCCAGTTCGACGACGCGCTCCC
GCCGATCTCCCCGAACGGGATCAAGGAGACGATGCACCGCCGCGCCATGCCCGGCGAGGGGATCTTCGACCTCGGACGGT
TCGCCGCCACCCTGCTCGACCGGGGCTGGTCGGGCCTGGTCAGCGTCGAGGTACTCAACGCCGAGCTGCGTGAGCTGCCC
GTCCCCGAGTTCGCCCGCCGCGCCTACGAGACGACCGCCGGGTTCTGGCGATGA

Upstream 100 bases:

>100_bases
CGTCGACTTTGAACGTCGGCTCGGAAGAGCCGTCATCCGGCGGACACACTGCGGCGCCGCCCCCCGGTCGCGCCGTCGGC
GCACCAAGGCGGGACGGGCG

Downstream 100 bases:

>100_bases
CCTCGCGCCGCCCACCCGGGACTCGCGCGTGACCAGGACCGGCGCTGGCGCCGGTCCTGGAGCCGGTGCCCGTGGCGGAG
CCGGCGCCGGTGCCGCCACC

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like Protein; Sugar Phosphate Isomerase/Epimerase

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTSEPRVELALTPDSRWDVDTAGLVAAAAGAGFGSVGLAEANADAAGAAVLAAAGLRCHEILALIVTDDEQATIDQARRV
AKAAAAVNARWVLTGFRVGLDERSGPLIARCAALFAAAGAGMAVEFSPLGGTKSIATAVDIVEAAGPDRAGVLIDTWHFF
NGESTWEQLEQVPLDRIAYVQFDDALPPISPNGIKETMHRRAMPGEGIFDLGRFAATLLDRGWSGLVSVEVLNAELRELP
VPEFARRAYETTAGFWR

Sequences:

>Translated_257_residues
MTSEPRVELALTPDSRWDVDTAGLVAAAAGAGFGSVGLAEANADAAGAAVLAAAGLRCHEILALIVTDDEQATIDQARRV
AKAAAAVNARWVLTGFRVGLDERSGPLIARCAALFAAAGAGMAVEFSPLGGTKSIATAVDIVEAAGPDRAGVLIDTWHFF
NGESTWEQLEQVPLDRIAYVQFDDALPPISPNGIKETMHRRAMPGEGIFDLGRFAATLLDRGWSGLVSVEVLNAELRELP
VPEFARRAYETTAGFWR
>Mature_256_residues
TSEPRVELALTPDSRWDVDTAGLVAAAAGAGFGSVGLAEANADAAGAAVLAAAGLRCHEILALIVTDDEQATIDQARRVA
KAAAAVNARWVLTGFRVGLDERSGPLIARCAALFAAAGAGMAVEFSPLGGTKSIATAVDIVEAAGPDRAGVLIDTWHFFN
GESTWEQLEQVPLDRIAYVQFDDALPPISPNGIKETMHRRAMPGEGIFDLGRFAATLLDRGWSGLVSVEVLNAELRELPV
PEFARRAYETTAGFWR

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27128; Mature: 26997

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEPRVELALTPDSRWDVDTAGLVAAAAGAGFGSVGLAEANADAAGAAVLAAAGLRCHE
CCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH
ILALIVTDDEQATIDQARRVAKAAAAVNARWVLTGFRVGLDERSGPLIARCAALFAAAGA
EEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCC
GMAVEFSPLGGTKSIATAVDIVEAAGPDRAGVLIDTWHFFNGESTWEQLEQVPLDRIAYV
CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHCCHHHEEEE
QFDDALPPISPNGIKETMHRRAMPGEGIFDLGRFAATLLDRGWSGLVSVEVLNAELRELP
EECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHCC
VPEFARRAYETTAGFWR
CCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSEPRVELALTPDSRWDVDTAGLVAAAAGAGFGSVGLAEANADAAGAAVLAAAGLRCHE
CCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHH
ILALIVTDDEQATIDQARRVAKAAAAVNARWVLTGFRVGLDERSGPLIARCAALFAAAGA
EEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCC
GMAVEFSPLGGTKSIATAVDIVEAAGPDRAGVLIDTWHFFNGESTWEQLEQVPLDRIAYV
CCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHCCHHHEEEE
QFDDALPPISPNGIKETMHRRAMPGEGIFDLGRFAATLLDRGWSGLVSVEVLNAELRELP
EECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHCC
VPEFARRAYETTAGFWR
CCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA