| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fabG [H]
Identifier: 158315697
GI number: 158315697
Start: 4675340
End: 4676134
Strand: Reverse
Name: fabG [H]
Synonym: Franean1_3909
Alternate gene names: 158315697
Gene position: 4676134-4675340 (Counterclockwise)
Preceding gene: 158315698
Following gene: 158315696
Centisome position: 52.06
GC content: 74.59
Gene sequence:
>795_bases ATGAGCACGCCGATGACCGGCCTGCTGGACCTGACCGGCCGGGTGGCCATCGTCACCGGCGGCGGGACGGGCATCGGGGC GGCCACCGCGCGGCTGCTCGCCGCCCACGGCGCCGACGTGGCCGTCGCCGCGCGCACCGTCGACGAGCTGGAGCGGACCG CGGCGGACATCCGGGCCGCCACCGGCCGCCGCTGCCTGGCCGTGCCGACGGACGTCAAGGACGAGGAGCAGGTGATCCGG CTGGTGCGGCGCACCGTCGAGGAGCTCGGCCGGATCGACGTGCTGGTCAACAACGCCGGCGGCACCCGCATGGGCCCGCT CTCCTCGCTGCCGACCAGGGCCTGGGACGCCAGCTTCGACCTCAACGTGCGGGCGGCCTACTTCTGCACCCGGGAGGCCG GCCGTCACCTGGTCGCGCAGCGCTCGGGCGCGATCGTCAACATCTCCTCGGACGCCGGCCTGCACGGAGTGCGCGGCGGA GCGCACTACGCCTCGGCCAAGGCCGCGCTGCAGATGTTCACGACGGTCACCGCGGCCGAGTGGGGACGTTACGGGGTGCG TGCCAACTGCCTCGCTGTCGGGCCGGTCGCCTCGGAGCGCGCAGTCGAGGCGTGGCGCGTCGCCGGCATCGACACGTCCG AGTTCAACACCGCCACCCCTCTGGGCCGGCCGGGGACGCCCGCGGAGGTCGCGAACGCGGTCCTCTTCTTCGCCAGCGAC GCGGCGTCCTACATCACCGGGCAGACCCTCGCCGTCGACGGCGGACCGAGCCTGGGCGGGATCCGCGACACCTGA
Upstream 100 bases:
>100_bases CCGAGTGCGGCTTCGACGTCGGCGTCGAGCAGATCACCCGGCTGTTCGTCAACGCGCTCCAGCTGCGCGACCCCGCGGAG CCGCCCCCGAGCGGGAACGC
Downstream 100 bases:
>100_bases GGCGCGGCTCAGAACCTCATGCGTCTCCTGAGCGGACGCTGAGCCCGCCCCGGTTCGGAATCACCAGATCATGATCGTGA ACGCTGACCCAACGCCGTCA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSTPMTGLLDLTGRVAIVTGGGTGIGAATARLLAAHGADVAVAARTVDELERTAADIRAATGRRCLAVPTDVKDEEQVIR LVRRTVEELGRIDVLVNNAGGTRMGPLSSLPTRAWDASFDLNVRAAYFCTREAGRHLVAQRSGAIVNISSDAGLHGVRGG AHYASAKAALQMFTTVTAAEWGRYGVRANCLAVGPVASERAVEAWRVAGIDTSEFNTATPLGRPGTPAEVANAVLFFASD AASYITGQTLAVDGGPSLGGIRDT
Sequences:
>Translated_264_residues MSTPMTGLLDLTGRVAIVTGGGTGIGAATARLLAAHGADVAVAARTVDELERTAADIRAATGRRCLAVPTDVKDEEQVIR LVRRTVEELGRIDVLVNNAGGTRMGPLSSLPTRAWDASFDLNVRAAYFCTREAGRHLVAQRSGAIVNISSDAGLHGVRGG AHYASAKAALQMFTTVTAAEWGRYGVRANCLAVGPVASERAVEAWRVAGIDTSEFNTATPLGRPGTPAEVANAVLFFASD AASYITGQTLAVDGGPSLGGIRDT >Mature_263_residues STPMTGLLDLTGRVAIVTGGGTGIGAATARLLAAHGADVAVAARTVDELERTAADIRAATGRRCLAVPTDVKDEEQVIRL VRRTVEELGRIDVLVNNAGGTRMGPLSSLPTRAWDASFDLNVRAAYFCTREAGRHLVAQRSGAIVNISSDAGLHGVRGGA HYASAKAALQMFTTVTAAEWGRYGVRANCLAVGPVASERAVEAWRVAGIDTSEFNTATPLGRPGTPAEVANAVLFFASDA ASYITGQTLAVDGGPSLGGIRDT
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=34.9019607843137, Blast_Score=150, Evalue=9e-37, Organism=Homo sapiens, GI10190704, Length=245, Percent_Identity=35.5102040816327, Blast_Score=148, Evalue=4e-36, Organism=Homo sapiens, GI4503301, Length=246, Percent_Identity=34.9593495934959, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=33.8775510204082, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=34.6774193548387, Blast_Score=114, Evalue=7e-26, Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=32.8185328185328, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI66933014, Length=252, Percent_Identity=32.1428571428571, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI15277342, Length=268, Percent_Identity=30.5970149253731, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI109715829, Length=243, Percent_Identity=31.6872427983539, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=29.9212598425197, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI40254986, Length=186, Percent_Identity=31.1827956989247, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI59889578, Length=196, Percent_Identity=34.6938775510204, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI4504505, Length=215, Percent_Identity=30.6976744186047, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI209862901, Length=211, Percent_Identity=33.175355450237, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI19923983, Length=211, Percent_Identity=33.175355450237, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI126723750, Length=265, Percent_Identity=29.811320754717, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI126723191, Length=195, Percent_Identity=32.3076923076923, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI40807363, Length=160, Percent_Identity=30, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=30.4123711340206, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=28.8557213930348, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI4503817, Length=182, Percent_Identity=29.1208791208791, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI20149619, Length=237, Percent_Identity=27.4261603375527, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=31.0880829015544, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=30, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI7657478, Length=219, Percent_Identity=30.1369863013699, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI225579078, Length=223, Percent_Identity=28.2511210762332, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=33.0645161290323, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=34.251968503937, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=36.144578313253, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1786812, Length=260, Percent_Identity=34.2307692307692, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1790717, Length=259, Percent_Identity=28.957528957529, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=32.3886639676113, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=30.241935483871, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=31.7647058823529, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=31.5789473684211, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=31.5789473684211, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=30.078125, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=32.520325203252, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787526, Length=248, Percent_Identity=27.8225806451613, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787820, Length=161, Percent_Identity=26.7080745341615, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17536025, Length=255, Percent_Identity=36.078431372549, Blast_Score=135, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=36.144578313253, Blast_Score=131, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=33.596837944664, Blast_Score=130, Evalue=8e-31, Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=34.469696969697, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=31.2267657992565, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=33.8461538461538, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=35.0746268656716, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=34.8, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=34.469696969697, Blast_Score=123, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=32.4626865671642, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI193204405, Length=269, Percent_Identity=31.2267657992565, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17561272, Length=249, Percent_Identity=35.7429718875502, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=34.9624060150376, Blast_Score=121, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=32.0754716981132, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=32.6996197718631, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=34.1911764705882, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=32.0610687022901, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=33.5849056603774, Blast_Score=114, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=31.203007518797, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17560676, Length=259, Percent_Identity=32.4324324324324, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=33.6, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=35.4838709677419, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI72000259, Length=266, Percent_Identity=30.8270676691729, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17544670, Length=276, Percent_Identity=29.7101449275362, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=33.2075471698113, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17561402, Length=249, Percent_Identity=28.5140562248996, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI115534694, Length=256, Percent_Identity=33.203125, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17568967, Length=204, Percent_Identity=32.843137254902, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=32.9588014981273, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17555612, Length=209, Percent_Identity=32.5358851674641, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71997099, Length=210, Percent_Identity=32.3809523809524, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17508895, Length=163, Percent_Identity=29.4478527607362, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17508651, Length=248, Percent_Identity=27.4193548387097, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71982365, Length=189, Percent_Identity=26.984126984127, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17558628, Length=190, Percent_Identity=28.9473684210526, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17538182, Length=269, Percent_Identity=27.8810408921933, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17564282, Length=155, Percent_Identity=27.741935483871, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI193203115, Length=256, Percent_Identity=26.5625, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203117, Length=180, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=30.9236947791165, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6322861, Length=208, Percent_Identity=29.8076923076923, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6323882, Length=204, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=7e-13, Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=38.5826771653543, Blast_Score=144, Evalue=6e-35, Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=38.5542168674699, Blast_Score=142, Evalue=2e-34, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=35.8267716535433, Blast_Score=137, Evalue=9e-33, Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=37.7510040160643, Blast_Score=134, Evalue=6e-32, Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=33.8645418326693, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=31.2, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI24644337, Length=262, Percent_Identity=31.6793893129771, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI24643142, Length=252, Percent_Identity=28.5714285714286, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI18859837, Length=204, Percent_Identity=32.843137254902, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28571387, Length=196, Percent_Identity=32.1428571428571, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24580925, Length=206, Percent_Identity=29.126213592233, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357673, Length=189, Percent_Identity=28.042328042328, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24648693, Length=197, Percent_Identity=34.010152284264, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355889, Length=197, Percent_Identity=34.010152284264, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355631, Length=180, Percent_Identity=29.4444444444444, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581726, Length=168, Percent_Identity=30.3571428571429, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24663911, Length=232, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI116007236, Length=237, Percent_Identity=26.5822784810127, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI21358495, Length=234, Percent_Identity=25.6410256410256, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641388, Length=237, Percent_Identity=29.957805907173, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641232, Length=142, Percent_Identity=33.0985915492958, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24648944, Length=145, Percent_Identity=36.551724137931, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24640442, Length=198, Percent_Identity=28.2828282828283, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24649181, Length=160, Percent_Identity=33.125, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007234, Length=142, Percent_Identity=35.9154929577465, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007232, Length=142, Percent_Identity=35.9154929577465, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27301; Mature: 27170
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPMTGLLDLTGRVAIVTGGGTGIGAATARLLAAHGADVAVAARTVDELERTAADIRAA CCCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TGRRCLAVPTDVKDEEQVIRLVRRTVEELGRIDVLVNNAGGTRMGPLSSLPTRAWDASFD CCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC LNVRAAYFCTREAGRHLVAQRSGAIVNISSDAGLHGVRGGAHYASAKAALQMFTTVTAAE CCEEEEEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WGRYGVRANCLAVGPVASERAVEAWRVAGIDTSEFNTATPLGRPGTPAEVANAVLFFASD HCCCCCEEEEEEECCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHEEEEEECC AASYITGQTLAVDGGPSLGGIRDT HHHHHCCCEEEECCCCCCCCCCCC >Mature Secondary Structure STPMTGLLDLTGRVAIVTGGGTGIGAATARLLAAHGADVAVAARTVDELERTAADIRAA CCCCCCCEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TGRRCLAVPTDVKDEEQVIRLVRRTVEELGRIDVLVNNAGGTRMGPLSSLPTRAWDASFD CCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC LNVRAAYFCTREAGRHLVAQRSGAIVNISSDAGLHGVRGGAHYASAKAALQMFTTVTAAE CCEEEEEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WGRYGVRANCLAVGPVASERAVEAWRVAGIDTSEFNTATPLGRPGTPAEVANAVLFFASD HCCCCCEEEEEEECCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHEEEEEECC AASYITGQTLAVDGGPSLGGIRDT HHHHHCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]