| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315606
Identifier: 158315606
GI number: 158315606
Start: 4531225
End: 4533678
Strand: Reverse
Name: 158315606
Synonym: Franean1_3815
Alternate gene names: NA
Gene position: 4533678-4531225 (Counterclockwise)
Preceding gene: 158315610
Following gene: 158315605
Centisome position: 50.47
GC content: 72.05
Gene sequence:
>2454_bases GTGTTGTCGGAGCCATCGGGTGCGAGACAATCGCGATCCGGGGAACAACGCACCCGGGCGGCGGACCCGCTGCGCACCAA GCCGGCGCGCTCGCCTCACCCCAGCGCGGACCGGCCCGGCAACCTGCTGGCCCTGCAGACGCTCGCCGGCAACGCGGCGG TCACCGACCTGATCGAAGCGGCCGGACCGCCCGGTGTGGCGCGCTGGACCGGACCGATCAGCTTTCAGTCCCAGGCCTCG TTACTGGACGAGGCGCGCAAGGGCAGCTACAACGCGGTCATTCAGCTGGACGAGGCGACCTTGGCCGGCGCGGACGACAA CGATCGCCTCAAGTGGATTGATCAGGTCAACGACAGCACTCTGGTCGTCCTGCGCGCCTCCCGGGCGCTGGAACGGATCT GGCGAAGCTTCGGCAGCCGTTTTCTCGAGGTCGCCGGGGCGAACCCGGACAACCTGGCCCGCTGGCGGCGCAGCTGCGCG CGACACACCGGGCTGCCCGAGCAGGTGCCGCAGGCCGCGGACCTGCAGGGCGCCTGGTTGCGGGACATTCGCACGATCGG CGGCGGCTGTCTGGACACCAATGAGGAGTTCGCCAGGAACAAGCTCCAGCAGTTCGGCGCGTCCGAGTCGGGCGACACCA TGGCGGCGCCAACCGACGAGCAGGCAAACGCGCTGAGCCAACTGCAGACGGCCGCCGAGGGGCTGGCCGCGCTGCGTTGG GGACAGGAGACCGCGCGGCAGATGTACGTCGGGTATGTCGACTACCTGCCGCCGGCCGGTTCGATGCAGGACGCCCACCA CTACCGCCGGGTCCGGTTCGACCCGACCGCGGCGCCGCCGCTGACGAGGATCGAACGTGACCGGGAGCGGCCGGCCTACC TCTATCGCGAGCTCACCGAGACCGAGGAGCTGGTCTCGGACGATGCCGACCCGAATGCCCTCGCCCCCGTCCAGTCCTAC GAGGATGCGCGCCGGAAATACGACGAGGCGGAAGCCGCCGCGAGCGTGACCCTGTCGATCTATCCGGAGCTGTTCGCGTT CTCCGGCAGCCAGTCCGATGCCGGGCTGGGCCAGTTCGCGGTCGCCCAAAGCAGCTCCGCGGCCCGGCAACAGTTGGTGA CCGGGCTACGGACCATGCTGAGTCACATCCGCGCCACCAGACAGCAGCTGGGGCCCGGCGGTGGCCTCGACCCGCTGGAC CTCACCCCCATCCACCGGCGACTGCTCCGCGGCGAGATCACGGCGTCTTCGGGCACCGACTGGACCCGGCCCTTCGCGCG CGAGGTGGCGGGAAACCTCGTCCAGGGCCACAACGTCGACATCGCCCTGCACCGGCTGGGGCTCCAGCTGATTGCCGAGG CCGCGTTCCTCTTCGCCCCGGCGACGGGTGGGCTGACCGCCGTCGCCGCGCTGACCCTCGCCACCGGTGCCTCCGCCGGG AACGTCGCTCTGGACGCCAGCCGGTACGCCGCCCTCGCCGACGCGGCGGCATCGGCGGCCCGCCCGGGTACAGCACTGGT CGACCGCCGGACCGTCGACGACGCCCGGATGGCCACCGAGTCGGAGGCGATCGCGCTCGCCCTCGCAGCCCTCGCCCTGG GCGCCGCCGCGGCCGCCGGTGCCCTGCGCGCCTGGCGTGCCCGGCAGACGCCGCCACCAGAACAGCCGCCCCCCGCCCAG CCGCCGAGCGGGGGGCGGCCGGCCCAACAGGGCAACGCACCCCAGCAGGGCGGACAACAAGGCGCGCCCCAGCCGGGGAC GCCACAAGCGGGCGCGACTGAGCAGGGCGCGCCGCAGCAGGGGAACGCGCCCCAGCAGCCGCCGGACCCCGCTGCGGCCG TGGTGGCCCAGGCACAGGCGCAGACACAGGCCGCCCGCGCCGCCTTCGCAGCCGAGATCGGAATCGACGCGGGGACGCTG GCCGGCTTCACCGAGGAGGAGATCAACCGGCTGCGTCAGCTGCTTCCCAACAGGCACCCCAGCCGAATAGCGGGGCTGCG CAACTACCTCAGCGAGCAGGTGAGCCGGGGCCGACACACCAGGAACATCCTGCGCACCCTGGAGGAGATGGAGCCACGGG AGCGGGCGCGCTACCTCGACCGGCGAGCCGCCATCCGATGGAATCCCGACTGGCGTGGCCGTGACCCGGCGCCCCGGCTG GAAGTCGGCAACGCGGACGAGGGGTGGACGCACATCGATGCGCGGCATGTCACCGGCAACGCTGCCGGCGGAGCCGGTGA CCTGTTCGCGCCGGGGACGACACGGCAACAGATCTTCGAGGCGGCGGTCGAGGTCATCGAGCGCGGAAACCGCGTCTCGG CCCGCGGCCAGCGGATCACGACGTTCGAACGGTCGTTGTACGTCAACGGGCGGCGGGACGCGATCCGGGTGACGGTGGAC ACCTCGGACGGTCGTATTATCACCGTCTTTCCCGTCCGCGGAGGTGGGCCGTGA
Upstream 100 bases:
>100_bases TAGCGGCACGCTGCTTGTGACCCCGGCAACTGTCACGATCGTTCGTGCATACGCACGTCCGGGCGGGAGTGGGTCGGGAG CGCGAGCAAGCAGGGAGCAG
Downstream 100 bases:
>100_bases GCCTGTCGTTCACCTTCTCGCCACTGGCGCCGACCACCGGACGCCTGACCGGATTCAGCCGGGGGCACATGACGGTCGAG GGCACGGTCGAGGGCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 817; Mature: 817
Protein sequence:
>817_residues MLSEPSGARQSRSGEQRTRAADPLRTKPARSPHPSADRPGNLLALQTLAGNAAVTDLIEAAGPPGVARWTGPISFQSQAS LLDEARKGSYNAVIQLDEATLAGADDNDRLKWIDQVNDSTLVVLRASRALERIWRSFGSRFLEVAGANPDNLARWRRSCA RHTGLPEQVPQAADLQGAWLRDIRTIGGGCLDTNEEFARNKLQQFGASESGDTMAAPTDEQANALSQLQTAAEGLAALRW GQETARQMYVGYVDYLPPAGSMQDAHHYRRVRFDPTAAPPLTRIERDRERPAYLYRELTETEELVSDDADPNALAPVQSY EDARRKYDEAEAAASVTLSIYPELFAFSGSQSDAGLGQFAVAQSSSAARQQLVTGLRTMLSHIRATRQQLGPGGGLDPLD LTPIHRRLLRGEITASSGTDWTRPFAREVAGNLVQGHNVDIALHRLGLQLIAEAAFLFAPATGGLTAVAALTLATGASAG NVALDASRYAALADAAASAARPGTALVDRRTVDDARMATESEAIALALAALALGAAAAAGALRAWRARQTPPPEQPPPAQ PPSGGRPAQQGNAPQQGGQQGAPQPGTPQAGATEQGAPQQGNAPQQPPDPAAAVVAQAQAQTQAARAAFAAEIGIDAGTL AGFTEEEINRLRQLLPNRHPSRIAGLRNYLSEQVSRGRHTRNILRTLEEMEPRERARYLDRRAAIRWNPDWRGRDPAPRL EVGNADEGWTHIDARHVTGNAAGGAGDLFAPGTTRQQIFEAAVEVIERGNRVSARGQRITTFERSLYVNGRRDAIRVTVD TSDGRIITVFPVRGGGP
Sequences:
>Translated_817_residues MLSEPSGARQSRSGEQRTRAADPLRTKPARSPHPSADRPGNLLALQTLAGNAAVTDLIEAAGPPGVARWTGPISFQSQAS LLDEARKGSYNAVIQLDEATLAGADDNDRLKWIDQVNDSTLVVLRASRALERIWRSFGSRFLEVAGANPDNLARWRRSCA RHTGLPEQVPQAADLQGAWLRDIRTIGGGCLDTNEEFARNKLQQFGASESGDTMAAPTDEQANALSQLQTAAEGLAALRW GQETARQMYVGYVDYLPPAGSMQDAHHYRRVRFDPTAAPPLTRIERDRERPAYLYRELTETEELVSDDADPNALAPVQSY EDARRKYDEAEAAASVTLSIYPELFAFSGSQSDAGLGQFAVAQSSSAARQQLVTGLRTMLSHIRATRQQLGPGGGLDPLD LTPIHRRLLRGEITASSGTDWTRPFAREVAGNLVQGHNVDIALHRLGLQLIAEAAFLFAPATGGLTAVAALTLATGASAG NVALDASRYAALADAAASAARPGTALVDRRTVDDARMATESEAIALALAALALGAAAAAGALRAWRARQTPPPEQPPPAQ PPSGGRPAQQGNAPQQGGQQGAPQPGTPQAGATEQGAPQQGNAPQQPPDPAAAVVAQAQAQTQAARAAFAAEIGIDAGTL AGFTEEEINRLRQLLPNRHPSRIAGLRNYLSEQVSRGRHTRNILRTLEEMEPRERARYLDRRAAIRWNPDWRGRDPAPRL EVGNADEGWTHIDARHVTGNAAGGAGDLFAPGTTRQQIFEAAVEVIERGNRVSARGQRITTFERSLYVNGRRDAIRVTVD TSDGRIITVFPVRGGGP >Mature_817_residues MLSEPSGARQSRSGEQRTRAADPLRTKPARSPHPSADRPGNLLALQTLAGNAAVTDLIEAAGPPGVARWTGPISFQSQAS LLDEARKGSYNAVIQLDEATLAGADDNDRLKWIDQVNDSTLVVLRASRALERIWRSFGSRFLEVAGANPDNLARWRRSCA RHTGLPEQVPQAADLQGAWLRDIRTIGGGCLDTNEEFARNKLQQFGASESGDTMAAPTDEQANALSQLQTAAEGLAALRW GQETARQMYVGYVDYLPPAGSMQDAHHYRRVRFDPTAAPPLTRIERDRERPAYLYRELTETEELVSDDADPNALAPVQSY EDARRKYDEAEAAASVTLSIYPELFAFSGSQSDAGLGQFAVAQSSSAARQQLVTGLRTMLSHIRATRQQLGPGGGLDPLD LTPIHRRLLRGEITASSGTDWTRPFAREVAGNLVQGHNVDIALHRLGLQLIAEAAFLFAPATGGLTAVAALTLATGASAG NVALDASRYAALADAAASAARPGTALVDRRTVDDARMATESEAIALALAALALGAAAAAGALRAWRARQTPPPEQPPPAQ PPSGGRPAQQGNAPQQGGQQGAPQPGTPQAGATEQGAPQQGNAPQQPPDPAAAVVAQAQAQTQAARAAFAAEIGIDAGTL AGFTEEEINRLRQLLPNRHPSRIAGLRNYLSEQVSRGRHTRNILRTLEEMEPRERARYLDRRAAIRWNPDWRGRDPAPRL EVGNADEGWTHIDARHVTGNAAGGAGDLFAPGTTRQQIFEAAVEVIERGNRVSARGQRITTFERSLYVNGRRDAIRVTVD TSDGRIITVFPVRGGGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87393; Mature: 87393
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEPSGARQSRSGEQRTRAADPLRTKPARSPHPSADRPGNLLALQTLAGNAAVTDLIEA CCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH AGPPGVARWTGPISFQSQASLLDEARKGSYNAVIQLDEATLAGADDNDRLKWIDQVNDST CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCCE LVVLRASRALERIWRSFGSRFLEVAGANPDNLARWRRSCARHTGLPEQVPQAADLQGAWL EEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHH RDIRTIGGGCLDTNEEFARNKLQQFGASESGDTMAAPTDEQANALSQLQTAAEGLAALRW HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GQETARQMYVGYVDYLPPAGSMQDAHHYRRVRFDPTAAPPLTRIERDRERPAYLYRELTE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHCCCHHHHHHHHHH TEELVSDDADPNALAPVQSYEDARRKYDEAEAAASVTLSIYPELFAFSGSQSDAGLGQFA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCCCCCCCCHHH VAQSSSAARQQLVTGLRTMLSHIRATRQQLGPGGGLDPLDLTPIHRRLLRGEITASSGTD HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC WTRPFAREVAGNLVQGHNVDIALHRLGLQLIAEAAFLFAPATGGLTAVAALTLATGASAG CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC NVALDASRYAALADAAASAARPGTALVDRRTVDDARMATESEAIALALAALALGAAAAAG CEEECHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRAWRARQTPPPEQPPPAQPPSGGRPAQQGNAPQQGGQQGAPQPGTPQAGATEQGAPQQ HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNAPQQPPDPAAAVVAQAQAQTQAARAAFAAEIGIDAGTLAGFTEEEINRLRQLLPNRHP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCH SRIAGLRNYLSEQVSRGRHTRNILRTLEEMEPRERARYLDRRAAIRWNPDWRGRDPAPRL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCCCCCCCCC EVGNADEGWTHIDARHVTGNAAGGAGDLFAPGTTRQQIFEAAVEVIERGNRVSARGQRIT CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE TFERSLYVNGRRDAIRVTVDTSDGRIITVFPVRGGGP EEEHHEEECCCCCEEEEEEECCCCEEEEEEECCCCCC >Mature Secondary Structure MLSEPSGARQSRSGEQRTRAADPLRTKPARSPHPSADRPGNLLALQTLAGNAAVTDLIEA CCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH AGPPGVARWTGPISFQSQASLLDEARKGSYNAVIQLDEATLAGADDNDRLKWIDQVNDST CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCCE LVVLRASRALERIWRSFGSRFLEVAGANPDNLARWRRSCARHTGLPEQVPQAADLQGAWL EEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHH RDIRTIGGGCLDTNEEFARNKLQQFGASESGDTMAAPTDEQANALSQLQTAAEGLAALRW HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GQETARQMYVGYVDYLPPAGSMQDAHHYRRVRFDPTAAPPLTRIERDRERPAYLYRELTE HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHCCCHHHHHHHHHH TEELVSDDADPNALAPVQSYEDARRKYDEAEAAASVTLSIYPELFAFSGSQSDAGLGQFA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCCCCCCCCHHH VAQSSSAARQQLVTGLRTMLSHIRATRQQLGPGGGLDPLDLTPIHRRLLRGEITASSGTD HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC WTRPFAREVAGNLVQGHNVDIALHRLGLQLIAEAAFLFAPATGGLTAVAALTLATGASAG CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC NVALDASRYAALADAAASAARPGTALVDRRTVDDARMATESEAIALALAALALGAAAAAG CEEECHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRAWRARQTPPPEQPPPAQPPSGGRPAQQGNAPQQGGQQGAPQPGTPQAGATEQGAPQQ HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNAPQQPPDPAAAVVAQAQAQTQAARAAFAAEIGIDAGTLAGFTEEEINRLRQLLPNRHP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCCCCCH SRIAGLRNYLSEQVSRGRHTRNILRTLEEMEPRERARYLDRRAAIRWNPDWRGRDPAPRL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCCCCCCCCC EVGNADEGWTHIDARHVTGNAAGGAGDLFAPGTTRQQIFEAAVEVIERGNRVSARGQRIT CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE TFERSLYVNGRRDAIRVTVDTSDGRIITVFPVRGGGP EEEHHEEECCCCCEEEEEEECCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA