| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315610
Identifier: 158315610
GI number: 158315610
Start: 4536936
End: 4537553
Strand: Reverse
Name: 158315610
Synonym: Franean1_3819
Alternate gene names: NA
Gene position: 4537553-4536936 (Counterclockwise)
Preceding gene: 158315618
Following gene: 158315606
Centisome position: 50.52
GC content: 79.45
Gene sequence:
>618_bases GTGGCCGGCTGGCTGGCGGCCGAGTCCGACGGGAGGTGCCACCGCGGGCCGCCGGCCAGGCCAGTCATCTCCCGGACGGA CGTCGCCGGACTGGTCGTCGGCGGACTGGTCGCCGGCGAGCTCGCCGGCACGACCGGAGGCTGCGCGGCGGACGGTCCGG CCGTCGGGAGGTGCGGCTGCGGCGGGGCGCCGGCCGGCCGGGCACGGCGGTCGAGGCTGCGCACCATCGGCGCCGGCAGC GGCGAAGCGGACCGGGTGACCACCGGCGGCACCGTGGCGGCGGCTAGCGTCCTCGGCCGGGGCGGACCGGGCAGCGCGGC AGGCGGTTCGGTCACCAACCCGACCGGCCCGGACTCCACGGCGGGCATCGGGGAGACCGGTGGAACCGCGGAACCGACTG GCGTTGCCGAACCGGCCGGCGCCACGGAACCGGCCGCCTCGGTCGGCGCCACCGACCCTGCCTGCCATGTCGGACCCGCC GGCCGGCCGGAGCCCTCCGCGGAAGCGTCCGACCGCCGCCGGCTGCCCGCGGCGGGAGCGCGCGACATCAGGTCAGCCAC CAGATCCGGGACCGGGTCGGGTGCGGTACCGGGCGTGCGGTCGGCGGCGGACCGATAG
Upstream 100 bases:
>100_bases TCCGTAGCGGCGCGGCGAGGGCGGTTCGGCCACCGGCTCGGCCGCCCGGCGGGCAACGGACGGTGCTTCTATCACCCATC CACGGCGGGACGGGTGCGGC
Downstream 100 bases:
>100_bases ACCGCGCCGGTTCCCGGCACGGGCGTGGTGGTCAGCGGCCGGAAGCTGCCCCCGGCGGCGAACGGGGTCACGTCATGCGC GGGCGCCCGGAGCACGAGCG
Product: membrane protein, IniB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAGWLAAESDGRCHRGPPARPVISRTDVAGLVVGGLVAGELAGTTGGCAADGPAVGRCGCGGAPAGRARRSRLRTIGAGS GEADRVTTGGTVAAASVLGRGGPGSAAGGSVTNPTGPDSTAGIGETGGTAEPTGVAEPAGATEPAASVGATDPACHVGPA GRPEPSAEASDRRRLPAAGARDIRSATRSGTGSGAVPGVRSAADR
Sequences:
>Translated_205_residues MAGWLAAESDGRCHRGPPARPVISRTDVAGLVVGGLVAGELAGTTGGCAADGPAVGRCGCGGAPAGRARRSRLRTIGAGS GEADRVTTGGTVAAASVLGRGGPGSAAGGSVTNPTGPDSTAGIGETGGTAEPTGVAEPAGATEPAASVGATDPACHVGPA GRPEPSAEASDRRRLPAAGARDIRSATRSGTGSGAVPGVRSAADR >Mature_204_residues AGWLAAESDGRCHRGPPARPVISRTDVAGLVVGGLVAGELAGTTGGCAADGPAVGRCGCGGAPAGRARRSRLRTIGAGSG EADRVTTGGTVAAASVLGRGGPGSAAGGSVTNPTGPDSTAGIGETGGTAEPTGVAEPAGATEPAASVGATDPACHVGPAG RPEPSAEASDRRRLPAAGARDIRSATRSGTGSGAVPGVRSAADR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19293; Mature: 19162
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGWLAAESDGRCHRGPPARPVISRTDVAGLVVGGLVAGELAGTTGGCAADGPAVGRCGC CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GGAPAGRARRSRLRTIGAGSGEADRVTTGGTVAAASVLGRGGPGSAAGGSVTNPTGPDST CCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AGIGETGGTAEPTGVAEPAGATEPAASVGATDPACHVGPAGRPEPSAEASDRRRLPAAGA CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCH RDIRSATRSGTGSGAVPGVRSAADR HHHHHHHHCCCCCCCCCCCHHHCCC >Mature Secondary Structure AGWLAAESDGRCHRGPPARPVISRTDVAGLVVGGLVAGELAGTTGGCAADGPAVGRCGC CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC GGAPAGRARRSRLRTIGAGSGEADRVTTGGTVAAASVLGRGGPGSAAGGSVTNPTGPDST CCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AGIGETGGTAEPTGVAEPAGATEPAASVGATDPACHVGPAGRPEPSAEASDRRRLPAAGA CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCH RDIRSATRSGTGSGAVPGVRSAADR HHHHHHHHCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA