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The map label for this gene is iniC [H]

Identifier: 158315597

GI number: 158315597

Start: 4518953

End: 4520536

Strand: Reverse

Name: iniC [H]

Synonym: Franean1_3806

Alternate gene names: 158315597

Gene position: 4520536-4518953 (Counterclockwise)

Preceding gene: 158315598

Following gene: 158315592

Centisome position: 50.33

GC content: 77.21

Gene sequence:

>1584_bases
GTGACCGGCCCCGGGCAGGGCGGGCTGCGGGAACAGGTCCGCGCGCTGCTGTCCGACGCGGTCGACGCCTACCGCGGCAC
CCCCGCCGAGGCGCTGCTCCGTCATGAGCTCGGCAGGGTCGACGGGCCGCTGCGGGTGGCCATCGCCGGGCGGGTGAAGG
CCGGCAAGTCCACCCTGCTCAACGCCCTGGTCGGCGAGCAGGTGGCGGCGACGGACGCGACCGAGTGCACCCGTGTCGTG
ACCGCCTACACGGAAGGCGAGCGGGAGGCCGCCTGGGCGTATCTGCGGGAGGGATCAGTGGTCGAGGTGGCGCTGCGCCG
GACACCGGGCAGCACCCACGTCGACCTGGCCGGCCACGGGGAGGGCGAGGTCGAGGCGCTGCGGGTCGAGCTGCCGAGCC
CGCGGTTGCGGCGGCTGACGCTCATCGACACGCCGGGCATCGCGTCCCTGTCGGAGGAGCTCTCCCGGCACACGGAAAGC
TTCCTGCTGCCGGGCTCGGGGTGGCAGGCCGGACGCCCGCCGGGGCGGGCGCCCCGCGGGCCGTCCGCCCCGGCCGAGGC
GGCGGGCGATGCCGCCGCCGGAGGCATCGGGGTCGGCGCCGACGCCGTGCTCTACCTGCTGCGCTTCCTGCACGCCTCGG
ACGTCGGCTTCCTGGAGTCGTTCCGCCGGACCGGGGTGGGCGAGGCGACACCCGCCCATGCCATCGGCGTGCTCTCCCGG
GCGGACGAGGTCGCGCCCGGCCGCACCGAGTCGGTGGACCTCGCCCGACGCGCCGCCGCCGACATCGGCCGGGACGACCG
GGTACGCGCGCTGGTGCAGACCGTCGTCCCGGTCGCCGGCCTGCTCGCCCAGGCGGGCAGCCGGCTCACGACGGACGAGC
TCGCCCAGTTCCTGGTGCTGGCGGCGGAACCGGCCGAGGTGGCGGACGAGTTGCTGCTGTCGGCTGACCGGTTCGCCTTC
CCGGCGGCGGCCACCGGCGTCCCGGCACCGCTGCGCGCGCTGCTGCTCGACCGGCTCGGGCTGGCCGGCGTGCGGCTGGC
GGTGGCGCTCGTCCGGCTCGGGGAGGCGCGCGACCCGGCCGGGCTGGCCGCCGAGCTCGCCGCCCGCAGCGGCCTGCCCG
AACTGCGGGCGCTGCTGCGCGACCAGTTCACCGACCGGGCCGACGTGCTGAAGGCACAGCATGCGCTGGGCGTGCTGGAC
GACGTACTGGACGAGTTTCCGCACCGCTCGGTCGCGGCGCTGCGGGCCCGCCGGGAACGTCTCGAAGCCGGCGCACACGC
GCTCGCCGAGCTGAGGCTGCTCGGCGACCTGCGTACCGGCGTGGCCGACGTCGCCTCGCTCGGTGAGGACCGCCGCCGGG
AGATGGAGCGGCTGCTCGGCACGGACAGCACCGGCGCGCACGCCCGGCTCGGCCTGCCCCCCGGCGCCGGCCCGGACGAG
GTGCGGGCGGCCGCGCTGGAGGCCCTGGACACCTACCGGCGCCTGTCCGAGAACAGGCTGGCGGCCCGTCCCATCCGGCG
GGCCGCGACGGTGGTCCGCCGGAGCTGTGAGGGCCTGCTGCGCACCACCAGCCAGACGCGGTGA

Upstream 100 bases:

>100_bases
CGGTGGAGGCGGAGGTCGCCCGGCTGCGCTCGCTGGTGGGCACAGCCGGGGCGGCCGGCACAGTCAGCACCGCCGGCACC
GCCGACACGGGGATGGCGCC

Downstream 100 bases:

>100_bases
TCTCATCGGAGGTACCGCTCGAGCCTGCGTCGATCCAGACGATCAGAGGAGGTGAGTGAATGTGCGCCAGGCACTCGGAT
CACTACGCGTGGCGGCGGGA

Product: HSR1-like GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MTGPGQGGLREQVRALLSDAVDAYRGTPAEALLRHELGRVDGPLRVAIAGRVKAGKSTLLNALVGEQVAATDATECTRVV
TAYTEGEREAAWAYLREGSVVEVALRRTPGSTHVDLAGHGEGEVEALRVELPSPRLRRLTLIDTPGIASLSEELSRHTES
FLLPGSGWQAGRPPGRAPRGPSAPAEAAGDAAAGGIGVGADAVLYLLRFLHASDVGFLESFRRTGVGEATPAHAIGVLSR
ADEVAPGRTESVDLARRAAADIGRDDRVRALVQTVVPVAGLLAQAGSRLTTDELAQFLVLAAEPAEVADELLLSADRFAF
PAAATGVPAPLRALLLDRLGLAGVRLAVALVRLGEARDPAGLAAELAARSGLPELRALLRDQFTDRADVLKAQHALGVLD
DVLDEFPHRSVAALRARRERLEAGAHALAELRLLGDLRTGVADVASLGEDRRREMERLLGTDSTGAHARLGLPPGAGPDE
VRAAALEALDTYRRLSENRLAARPIRRAATVVRRSCEGLLRTTSQTR

Sequences:

>Translated_527_residues
MTGPGQGGLREQVRALLSDAVDAYRGTPAEALLRHELGRVDGPLRVAIAGRVKAGKSTLLNALVGEQVAATDATECTRVV
TAYTEGEREAAWAYLREGSVVEVALRRTPGSTHVDLAGHGEGEVEALRVELPSPRLRRLTLIDTPGIASLSEELSRHTES
FLLPGSGWQAGRPPGRAPRGPSAPAEAAGDAAAGGIGVGADAVLYLLRFLHASDVGFLESFRRTGVGEATPAHAIGVLSR
ADEVAPGRTESVDLARRAAADIGRDDRVRALVQTVVPVAGLLAQAGSRLTTDELAQFLVLAAEPAEVADELLLSADRFAF
PAAATGVPAPLRALLLDRLGLAGVRLAVALVRLGEARDPAGLAAELAARSGLPELRALLRDQFTDRADVLKAQHALGVLD
DVLDEFPHRSVAALRARRERLEAGAHALAELRLLGDLRTGVADVASLGEDRRREMERLLGTDSTGAHARLGLPPGAGPDE
VRAAALEALDTYRRLSENRLAARPIRRAATVVRRSCEGLLRTTSQTR
>Mature_526_residues
TGPGQGGLREQVRALLSDAVDAYRGTPAEALLRHELGRVDGPLRVAIAGRVKAGKSTLLNALVGEQVAATDATECTRVVT
AYTEGEREAAWAYLREGSVVEVALRRTPGSTHVDLAGHGEGEVEALRVELPSPRLRRLTLIDTPGIASLSEELSRHTESF
LLPGSGWQAGRPPGRAPRGPSAPAEAAGDAAAGGIGVGADAVLYLLRFLHASDVGFLESFRRTGVGEATPAHAIGVLSRA
DEVAPGRTESVDLARRAAADIGRDDRVRALVQTVVPVAGLLAQAGSRLTTDELAQFLVLAAEPAEVADELLLSADRFAFP
AAATGVPAPLRALLLDRLGLAGVRLAVALVRLGEARDPAGLAAELAARSGLPELRALLRDQFTDRADVLKAQHALGVLDD
VLDEFPHRSVAALRARRERLEAGAHALAELRLLGDLRTGVADVASLGEDRRREMERLLGTDSTGAHARLGLPPGAGPDEV
RAAALEALDTYRRLSENRLAARPIRRAATVVRRSCEGLLRTTSQTR

Specific function: Unknown

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 55558; Mature: 55427

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPGQGGLREQVRALLSDAVDAYRGTPAEALLRHELGRVDGPLRVAIAGRVKAGKSTLL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
NALVGEQVAATDATECTRVVTAYTEGEREAAWAYLREGSVVEVALRRTPGSTHVDLAGHG
HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCC
EGEVEALRVELPSPRLRRLTLIDTPGIASLSEELSRHTESFLLPGSGWQAGRPPGRAPRG
CCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCC
PSAPAEAAGDAAAGGIGVGADAVLYLLRFLHASDVGFLESFRRTGVGEATPAHAIGVLSR
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHH
ADEVAPGRTESVDLARRAAADIGRDDRVRALVQTVVPVAGLLAQAGSRLTTDELAQFLVL
HHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AAEPAEVADELLLSADRFAFPAAATGVPAPLRALLLDRLGLAGVRLAVALVRLGEARDPA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCH
GLAAELAARSGLPELRALLRDQFTDRADVLKAQHALGVLDDVLDEFPHRSVAALRARRER
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEAGAHALAELRLLGDLRTGVADVASLGEDRRREMERLLGTDSTGAHARLGLPPGAGPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHH
VRAAALEALDTYRRLSENRLAARPIRRAATVVRRSCEGLLRTTSQTR
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGPGQGGLREQVRALLSDAVDAYRGTPAEALLRHELGRVDGPLRVAIAGRVKAGKSTLL
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
NALVGEQVAATDATECTRVVTAYTEGEREAAWAYLREGSVVEVALRRTPGSTHVDLAGHG
HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEECCCC
EGEVEALRVELPSPRLRRLTLIDTPGIASLSEELSRHTESFLLPGSGWQAGRPPGRAPRG
CCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCC
PSAPAEAAGDAAAGGIGVGADAVLYLLRFLHASDVGFLESFRRTGVGEATPAHAIGVLSR
CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHH
ADEVAPGRTESVDLARRAAADIGRDDRVRALVQTVVPVAGLLAQAGSRLTTDELAQFLVL
HHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AAEPAEVADELLLSADRFAFPAAATGVPAPLRALLLDRLGLAGVRLAVALVRLGEARDPA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCH
GLAAELAARSGLPELRALLRDQFTDRADVLKAQHALGVLDDVLDEFPHRSVAALRARRER
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEAGAHALAELRLLGDLRTGVADVASLGEDRRREMERLLGTDSTGAHARLGLPPGAGPDE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHH
VRAAALEALDTYRRLSENRLAARPIRRAATVVRRSCEGLLRTTSQTR
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]