| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is mhqP [H]
Identifier: 158315530
GI number: 158315530
Start: 4424614
End: 4425120
Strand: Reverse
Name: mhqP [H]
Synonym: Franean1_3737
Alternate gene names: 158315530
Gene position: 4425120-4424614 (Counterclockwise)
Preceding gene: 158315531
Following gene: 158315529
Centisome position: 49.27
GC content: 67.06
Gene sequence:
>507_bases GTGGGCGACACCGCAGCGGCTTCGCGTGGCACTGACATCGGGCTGCTGCTCCTACGTCTCGGGCTCGGGCTGACCATGAC GGCGCATGGCAGCCAGAAGCTGTTCGGTTGGTTCGGTGGTGGCGGTCTCGACGGCACCGGCCAGTTCTTCGGCATGTCCG GCTATCCCGCGGGCAAGGCTATGGCGGTCATTGCGGGACTCAGTGAGACCCTCGGCGGACTCGGTCTCGTCTTCGGTGTA CTCACTCCACTGGCCGCCGCCGCGATCCTCGGAACGATGATCAACGCGGTGGCGGTGAAATGGGACGGTGGCTTCTTCGC TCCACAGGGAATCGAGTACGAGCTGTTCCTCGCCGTCGCCGGTGCCGCTGTCGCCCTGAGCGGCGCCGGTGCCTACGCGG CAGACCGCTTCCTGCCCGTCCTGCGCTCCCACCGGCTTGTCCACGGCGTCGCCGCCCTGGTCCTGGCAGTGCTCACCGCC CTGATTGTCCTACTGATCCGCGGATAA
Upstream 100 bases:
>100_bases CGACCAACATGTACGGCAGAGACAGGAGATAAGACGGGTGCCTTCTTCGACCAACACCAAGGCCGTGCCGGGACCCTTGG CCACCCTCAGGTTCTCTGGC
Downstream 100 bases:
>100_bases CCCCACGCAGACTGACACCCTTGTTCGTCCCGGGGAAAGAACGTCTGCTATTCCCGGTCGTCCACCAGGTCCACGACCTG GTGGACGACCACATCAACAA
Product: DoxX family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MGDTAAASRGTDIGLLLLRLGLGLTMTAHGSQKLFGWFGGGGLDGTGQFFGMSGYPAGKAMAVIAGLSETLGGLGLVFGV LTPLAAAAILGTMINAVAVKWDGGFFAPQGIEYELFLAVAGAAVALSGAGAYAADRFLPVLRSHRLVHGVAALVLAVLTA LIVLLIRG
Sequences:
>Translated_168_residues MGDTAAASRGTDIGLLLLRLGLGLTMTAHGSQKLFGWFGGGGLDGTGQFFGMSGYPAGKAMAVIAGLSETLGGLGLVFGV LTPLAAAAILGTMINAVAVKWDGGFFAPQGIEYELFLAVAGAAVALSGAGAYAADRFLPVLRSHRLVHGVAALVLAVLTA LIVLLIRG >Mature_167_residues GDTAAASRGTDIGLLLLRLGLGLTMTAHGSQKLFGWFGGGGLDGTGQFFGMSGYPAGKAMAVIAGLSETLGGLGLVFGVL TPLAAAAILGTMINAVAVKWDGGFFAPQGIEYELFLAVAGAAVALSGAGAYAADRFLPVLRSHRLVHGVAALVLAVLTAL IVLLIRG
Specific function: Putative oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 16827; Mature: 16696
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDTAAASRGTDIGLLLLRLGLGLTMTAHGSQKLFGWFGGGGLDGTGQFFGMSGYPAGKA CCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCEECCCCCCCCHH MAVIAGLSETLGGLGLVFGVLTPLAAAAILGTMINAVAVKWDGGFFAPQGIEYELFLAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEECCCCCCHHHHHHHH GAAVALSGAGAYAADRFLPVLRSHRLVHGVAALVLAVLTALIVLLIRG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GDTAAASRGTDIGLLLLRLGLGLTMTAHGSQKLFGWFGGGGLDGTGQFFGMSGYPAGKA CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCEECCCCCCCCHH MAVIAGLSETLGGLGLVFGVLTPLAAAAILGTMINAVAVKWDGGFFAPQGIEYELFLAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEECCCCCCHHHHHHHH GAAVALSGAGAYAADRFLPVLRSHRLVHGVAALVLAVLTALIVLLIRG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9341680; 9384377 [H]