| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315518
Identifier: 158315518
GI number: 158315518
Start: 4408936
End: 4409514
Strand: Reverse
Name: 158315518
Synonym: Franean1_3725
Alternate gene names: NA
Gene position: 4409514-4408936 (Counterclockwise)
Preceding gene: 158315519
Following gene: 158315517
Centisome position: 49.09
GC content: 56.3
Gene sequence:
>579_bases GTGCCGGGCAACGCGTACCGCCTCCTCTACAGAGATGAATACTTCGGAACCACCCTTGAACCTTCCCGGTTCAGGTGGAA ATATGACATAGAAGAGAGGGCCGACGACATGGATTTCCATCAGAAAAGAAACGAAGGCACTGCGGGTATCCAGGCACCCA CAGACTCTGGACGCCTCCGGCGTTCCCGGTCGAGCAGACGAATAGCATCCATCGCCATCGCCGTGGTTTCACTAGCAGCT TGTGACACGACAAGCACGCCGGATGAGAACTCGGCTATGAATCCCTCTACCGGAATAACGTATGTATCGGCGAGCCCGGG AACTGATGCCGGCAACTCGGAAGGCACCGAAACATACATCAGAAGATTCCGCGAGGAATTTCCTCGGCTGGCGCAAGGAA AAACCGACGCGCAGATTATCGGCGATGCTGAGGCCAGCTGCTCCGATATGGCTGCCAGCAGAAAAATCACCACCCCCTCA ATGGGGGAGCGCTACGGTCTCGGCGGATCAACAGCCGACCAGTTCACACTCCACAACATTGCACTGTTGGCCATGTCAAC CGTGTGTGGAATCCGCTGA
Upstream 100 bases:
>100_bases ACGGTCTGGCTGACCGACCCCGTCGATCCGTCTCCGCTATCAGGTCCCCCATCGACCTCACCTGCCGCCGGACAAGGACT GGTGTCAGTTAGCGGGAAAT
Downstream 100 bases:
>100_bases CACGCATCACATCGCCGCCACCGACGAGGGCGGACCCCGAGTCACCTCTGCGATACGCGAATCCTCCCGCCGTCGGGCGG CCCAGCCGGAGAACTGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MPGNAYRLLYRDEYFGTTLEPSRFRWKYDIEERADDMDFHQKRNEGTAGIQAPTDSGRLRRSRSSRRIASIAIAVVSLAA CDTTSTPDENSAMNPSTGITYVSASPGTDAGNSEGTETYIRRFREEFPRLAQGKTDAQIIGDAEASCSDMAASRKITTPS MGERYGLGGSTADQFTLHNIALLAMSTVCGIR
Sequences:
>Translated_192_residues MPGNAYRLLYRDEYFGTTLEPSRFRWKYDIEERADDMDFHQKRNEGTAGIQAPTDSGRLRRSRSSRRIASIAIAVVSLAA CDTTSTPDENSAMNPSTGITYVSASPGTDAGNSEGTETYIRRFREEFPRLAQGKTDAQIIGDAEASCSDMAASRKITTPS MGERYGLGGSTADQFTLHNIALLAMSTVCGIR >Mature_191_residues PGNAYRLLYRDEYFGTTLEPSRFRWKYDIEERADDMDFHQKRNEGTAGIQAPTDSGRLRRSRSSRRIASIAIAVVSLAAC DTTSTPDENSAMNPSTGITYVSASPGTDAGNSEGTETYIRRFREEFPRLAQGKTDAQIIGDAEASCSDMAASRKITTPSM GERYGLGGSTADQFTLHNIALLAMSTVCGIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20994; Mature: 20863
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGNAYRLLYRDEYFGTTLEPSRFRWKYDIEERADDMDFHQKRNEGTAGIQAPTDSGRLR CCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHH RSRSSRRIASIAIAVVSLAACDTTSTPDENSAMNPSTGITYVSASPGTDAGNSEGTETYI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH RRFREEFPRLAQGKTDAQIIGDAEASCSDMAASRKITTPSMGERYGLGGSTADQFTLHNI HHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALLAMSTVCGIR HHHHHHHHHCCC >Mature Secondary Structure PGNAYRLLYRDEYFGTTLEPSRFRWKYDIEERADDMDFHQKRNEGTAGIQAPTDSGRLR CCCEEEEEEECCCCCCCCCCCCEEEEECHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHH RSRSSRRIASIAIAVVSLAACDTTSTPDENSAMNPSTGITYVSASPGTDAGNSEGTETYI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHH RRFREEFPRLAQGKTDAQIIGDAEASCSDMAASRKITTPSMGERYGLGGSTADQFTLHNI HHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALLAMSTVCGIR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA