| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is estA [H]
Identifier: 158315519
GI number: 158315519
Start: 4409640
End: 4410806
Strand: Reverse
Name: estA [H]
Synonym: Franean1_3726
Alternate gene names: 158315519
Gene position: 4410806-4409640 (Counterclockwise)
Preceding gene: 158315520
Following gene: 158315518
Centisome position: 49.11
GC content: 65.47
Gene sequence:
>1167_bases GTGATCCACGCCGGCTCGCCGTTCCCTCGCAGCTGCGATCATCTGCCTGACGCCGTCGACACTGGAGCATCATTCACAAC CGGCGGTTACCTTCCATGCCCGCAGGTCAGACATCAGAAGTGCCATCCGAGACGGAAGTGGGAGGCAATGATAAGAACTC AGCTACGCGCCGGGTTGGTCTGCACACTCGCGTGCGGCACCCTGATCACCGCGGTCGCCCTCAACCGCCACGACGGCGGT TCAGCTCCAGCAGCGGCAGCCGCAGCGCTTCCCGAGACGACAACGACGCCGGTTCCGACTCGGACAGCAACTGCAACTGC AGCGCCAGCTCCAGCTCAGGGGGCATACGTCGCCCTAGGCGACTCCTATACCGCCGGTCCCGGAATCCCCTCCCAGATCG GAGAACCCGGCGGCTGCGATCGTTCGGACCGCAACTACCCGACGCTGATCGCCGAGAATCTGGATCTTGAGGAATCCGAT TTCACGGATATGAGCTGTTCCGGGGCCACGATCGCGGACCTGTCCTCGCCCCAGTCCACTGGGGACGGAGTCAACCCGGC CCAGTTCTCGGCCCTTTCCGCCACAACGCGGCTGGTCACGATCGGCATCGGCGGCAACGACATCGGTTTCACCTCGGTGG TCAAGCAGTGCGTCCGGGCCGGCGCGCTCTACAACGCGCTCGCCGGCGGCACCTCGAACGACGCACCCTGCAAGAGGAAG TACGTCTCCGCCGGAACCGACGAGGTACACGAGAAGATCCAGGCCGCAGGGCAACAGCTGTCCGTCGCGCTGGGCGAGAT CACCCGTCGCGCGCCGCAGGCCGACGTGTACATCGTGGGATACCCGGCAATCCTTCCCACCGACGGCGTCGGTTGCGCAC GCACCATGGGACTCACAACCGGCGACATCACCTACCTGCGCCAGAAGGAACAGGAGCTCAACACCATGCTGCAACAGCAG GCAGAAGCCGCCGGCGCCGGGTACATCGACACCTACACCCCTTCCCTCGACCGCGACGCCTGCGCGGCGAGAGACATCCG CTGGGTCGAGCCACTGATTCCCCTCAACCCCGCTGCCTCCGTCCACCCCAACGAACGCGGCGAACGCGGCATGGCCGACG CGATCCTCCAAAGCATGTCGCATCAGACGCCACCGACCCGATCGTGA
Upstream 100 bases:
>100_bases CTTGCCCCGAGCGTCGCCATTCCTGGCTCAGACCTAAACGATCCCTGCCAGAAACGCGAGAAAACACAACACTCGATCCG GCATTCAGGTTCGACTCATC
Downstream 100 bases:
>100_bases TCGCACACGTACATGCCCATCCCGCACGGTCTGGCTGACCGACCCCGTCGATCCGTCTCCGCTATCAGGTCCCCCATCGA CCTCACCTGCCGCCGGACAA
Product: GDSL family lipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MIHAGSPFPRSCDHLPDAVDTGASFTTGGYLPCPQVRHQKCHPRRKWEAMIRTQLRAGLVCTLACGTLITAVALNRHDGG SAPAAAAAALPETTTTPVPTRTATATAAPAPAQGAYVALGDSYTAGPGIPSQIGEPGGCDRSDRNYPTLIAENLDLEESD FTDMSCSGATIADLSSPQSTGDGVNPAQFSALSATTRLVTIGIGGNDIGFTSVVKQCVRAGALYNALAGGTSNDAPCKRK YVSAGTDEVHEKIQAAGQQLSVALGEITRRAPQADVYIVGYPAILPTDGVGCARTMGLTTGDITYLRQKEQELNTMLQQQ AEAAGAGYIDTYTPSLDRDACAARDIRWVEPLIPLNPAASVHPNERGERGMADAILQSMSHQTPPTRS
Sequences:
>Translated_388_residues MIHAGSPFPRSCDHLPDAVDTGASFTTGGYLPCPQVRHQKCHPRRKWEAMIRTQLRAGLVCTLACGTLITAVALNRHDGG SAPAAAAAALPETTTTPVPTRTATATAAPAPAQGAYVALGDSYTAGPGIPSQIGEPGGCDRSDRNYPTLIAENLDLEESD FTDMSCSGATIADLSSPQSTGDGVNPAQFSALSATTRLVTIGIGGNDIGFTSVVKQCVRAGALYNALAGGTSNDAPCKRK YVSAGTDEVHEKIQAAGQQLSVALGEITRRAPQADVYIVGYPAILPTDGVGCARTMGLTTGDITYLRQKEQELNTMLQQQ AEAAGAGYIDTYTPSLDRDACAARDIRWVEPLIPLNPAASVHPNERGERGMADAILQSMSHQTPPTRS >Mature_388_residues MIHAGSPFPRSCDHLPDAVDTGASFTTGGYLPCPQVRHQKCHPRRKWEAMIRTQLRAGLVCTLACGTLITAVALNRHDGG SAPAAAAAALPETTTTPVPTRTATATAAPAPAQGAYVALGDSYTAGPGIPSQIGEPGGCDRSDRNYPTLIAENLDLEESD FTDMSCSGATIADLSSPQSTGDGVNPAQFSALSATTRLVTIGIGGNDIGFTSVVKQCVRAGALYNALAGGTSNDAPCKRK YVSAGTDEVHEKIQAAGQQLSVALGEITRRAPQADVYIVGYPAILPTDGVGCARTMGLTTGDITYLRQKEQELNTMLQQQ AEAAGAGYIDTYTPSLDRDACAARDIRWVEPLIPLNPAASVHPNERGERGMADAILQSMSHQTPPTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40519; Mature: 40519
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHAGSPFPRSCDHLPDAVDTGASFTTGGYLPCPQVRHQKCHPRRKWEAMIRTQLRAGLV CCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCHH CTLACGTLITAVALNRHDGGSAPAAAAAALPETTTTPVPTRTATATAAPAPAQGAYVALG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC DSYTAGPGIPSQIGEPGGCDRSDRNYPTLIAENLDLEESDFTDMSCSGATIADLSSPQST CCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCC GDGVNPAQFSALSATTRLVTIGIGGNDIGFTSVVKQCVRAGALYNALAGGTSNDAPCKRK CCCCCHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH YVSAGTDEVHEKIQAAGQQLSVALGEITRRAPQADVYIVGYPAILPTDGVGCARTMGLTT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHCCCCC GDITYLRQKEQELNTMLQQQAEAAGAGYIDTYTPSLDRDACAARDIRWVEPLIPLNPAAS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCC VHPNERGERGMADAILQSMSHQTPPTRS CCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIHAGSPFPRSCDHLPDAVDTGASFTTGGYLPCPQVRHQKCHPRRKWEAMIRTQLRAGLV CCCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCHH CTLACGTLITAVALNRHDGGSAPAAAAAALPETTTTPVPTRTATATAAPAPAQGAYVALG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC DSYTAGPGIPSQIGEPGGCDRSDRNYPTLIAENLDLEESDFTDMSCSGATIADLSSPQST CCCCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCC GDGVNPAQFSALSATTRLVTIGIGGNDIGFTSVVKQCVRAGALYNALAGGTSNDAPCKRK CCCCCHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH YVSAGTDEVHEKIQAAGQQLSVALGEITRRAPQADVYIVGYPAILPTDGVGCARTMGLTT HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHCCCCC GDITYLRQKEQELNTMLQQQAEAAGAGYIDTYTPSLDRDACAARDIRWVEPLIPLNPAAS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCC VHPNERGERGMADAILQSMSHQTPPTRS CCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2254271; 7773790 [H]