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The map label for this gene is 158315403

Identifier: 158315403

GI number: 158315403

Start: 4266218

End: 4267654

Strand: Reverse

Name: 158315403

Synonym: Franean1_3605

Alternate gene names: NA

Gene position: 4267654-4266218 (Counterclockwise)

Preceding gene: 158315406

Following gene: 158315402

Centisome position: 47.51

GC content: 68.96

Gene sequence:

>1437_bases
GTGAGCCAGATGATCGCCTTCCTGCGCGCCGCTGGAGGCGACACCACCGAGGTGGAGGTCAAGTCTGCCGCCGGCGGGTT
ACCCGCCTCGTTGACCTCTACGATGAGCGCGCTGGCGAATCAGCCCGGGGGCGGGACCATCATCCTGGGGCTCGACGAGC
GGGCCGGGTTCCGCCCCGTCGAGCTCAGCGACCCGCAGATGCTCAAGCAGGGCCTGGCTGCCAGGGCCCGGGCATTCACA
CCGCCGGTCCGTCTCACGATCGACGACGGGGAGGTCGACGGGGCCACGGTCGTGGTTGCGCAGGTCCACGAGTGCGACCG
CTCGACCAAGCCCTGTCGCGTCACCGCGACCGGCAGGGCGTACCTACGTGGCTACGACGGCGACTACGCCCTGTCCGACA
TGGAGGAACAGGGGTTTCTGGCCGCTCGCCAGCCACCGCTGTTCGACCGTTCACCTGTCGAGGACGCCACCATCGACGAC
CTGGACACCGAACTCGTCGATACTTTTCTACTCGCCGTCCGCGAACGCGACCCCGCCGGGCTCGGCCGTTTTCCCGACGA
CACGGAGCTCCTGCGCCGGGCTGGAGTCACGATGGAAGGCGGGCAGCCGACCGTCGCGGGACTGCTCGCTCTCGGGGTCC
ATCCCCAACAATGGTTCCCTCGCTACGTCATCCAAGCCGCCGCGCAGCCCTTGCCCACAGACTCCGCCGCAACGCGGGCC
CGCAACCAGGTCACCATCAGCGGGCCGGTCCCGCGGATGCTTGACGCGGCGCTACTCTGGGCCCGACGTACCTTCGACAC
CGCCATCGTCGCCGAGATGGACGGTAGCGTTCGTGACCGTCCGATCTACCCACTCGTCGCCTTCCGTGAGTTGGTCGCCA
ACGCACTGATCCACCGCGACCTCGACCACTGGTCCGCCGGGCTGGCCGTCGAAGTGCGGCTTCTGCGGGACCGCCTGGTA
GTGGCCAATCCCGGAGGCCTGTACGGCATCACCGTCGACCGACTCGGGCGCGACGCGGTGACCTCCGCCCGCAACGCCAG
ACTGGTCGCGATCTGCCAGCACGTCCGCTCCCCGCAAACCGAAGCTCGGGTCATCGAAGCCCTCGCCAGCGGAATTCCCA
CCGTCACCGAGGCCCTCGCCGACCATGGCCTGCCGCCAGCCCACTACGTGGACAGCGGCATCCGGTTCACCGTCGTCCTC
CACCAGTTCGCGACCGCCCCGCCCGCGGCGACCGCCGAGCCCCCAATGGGCGCCACAGAGCGTCGCGTCTACCAGACCCT
GACCCGTCCGGGAAGAACAGTCAGCGACCTCGCCGAGGAGCTCGGGCTGTCCGCTCCGAACATCCGCAAGGCACTGCGAA
GCCTGCGCGGTCGCGGGCTGATCCTTCAACTCGGCGGCAGAGGCAAAGCCACCACCTACCAGCGGACGGACTCATAG

Upstream 100 bases:

>100_bases
CATGTTCTCCGATCTTGGGGCGCGAGCCACGACTGCCAAATGTAACCGCCGCACGCCAAATGTAACTCCGCCGTGGTTAC
ATTTGGGTGTGCCGCGTGAC

Downstream 100 bases:

>100_bases
CCGACCGATCCTCACCCGCCAACCACTTCGCGCCTTGGACCATGCCTGACCCACCCGTCCCTTCCGAGCCACCGACCTAC
GGCCGACTGCTCTGCGCCGT

Product: transcriptional regulator TrmB

Products: NA

Alternate protein names: Divergent AAA Domain Protein; ATP-Dependent DNA Helicase

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MSQMIAFLRAAGGDTTEVEVKSAAGGLPASLTSTMSALANQPGGGTIILGLDERAGFRPVELSDPQMLKQGLAARARAFT
PPVRLTIDDGEVDGATVVVAQVHECDRSTKPCRVTATGRAYLRGYDGDYALSDMEEQGFLAARQPPLFDRSPVEDATIDD
LDTELVDTFLLAVRERDPAGLGRFPDDTELLRRAGVTMEGGQPTVAGLLALGVHPQQWFPRYVIQAAAQPLPTDSAATRA
RNQVTISGPVPRMLDAALLWARRTFDTAIVAEMDGSVRDRPIYPLVAFRELVANALIHRDLDHWSAGLAVEVRLLRDRLV
VANPGGLYGITVDRLGRDAVTSARNARLVAICQHVRSPQTEARVIEALASGIPTVTEALADHGLPPAHYVDSGIRFTVVL
HQFATAPPAATAEPPMGATERRVYQTLTRPGRTVSDLAEELGLSAPNIRKALRSLRGRGLILQLGGRGKATTYQRTDS

Sequences:

>Translated_478_residues
MSQMIAFLRAAGGDTTEVEVKSAAGGLPASLTSTMSALANQPGGGTIILGLDERAGFRPVELSDPQMLKQGLAARARAFT
PPVRLTIDDGEVDGATVVVAQVHECDRSTKPCRVTATGRAYLRGYDGDYALSDMEEQGFLAARQPPLFDRSPVEDATIDD
LDTELVDTFLLAVRERDPAGLGRFPDDTELLRRAGVTMEGGQPTVAGLLALGVHPQQWFPRYVIQAAAQPLPTDSAATRA
RNQVTISGPVPRMLDAALLWARRTFDTAIVAEMDGSVRDRPIYPLVAFRELVANALIHRDLDHWSAGLAVEVRLLRDRLV
VANPGGLYGITVDRLGRDAVTSARNARLVAICQHVRSPQTEARVIEALASGIPTVTEALADHGLPPAHYVDSGIRFTVVL
HQFATAPPAATAEPPMGATERRVYQTLTRPGRTVSDLAEELGLSAPNIRKALRSLRGRGLILQLGGRGKATTYQRTDS
>Mature_477_residues
SQMIAFLRAAGGDTTEVEVKSAAGGLPASLTSTMSALANQPGGGTIILGLDERAGFRPVELSDPQMLKQGLAARARAFTP
PVRLTIDDGEVDGATVVVAQVHECDRSTKPCRVTATGRAYLRGYDGDYALSDMEEQGFLAARQPPLFDRSPVEDATIDDL
DTELVDTFLLAVRERDPAGLGRFPDDTELLRRAGVTMEGGQPTVAGLLALGVHPQQWFPRYVIQAAAQPLPTDSAATRAR
NQVTISGPVPRMLDAALLWARRTFDTAIVAEMDGSVRDRPIYPLVAFRELVANALIHRDLDHWSAGLAVEVRLLRDRLVV
ANPGGLYGITVDRLGRDAVTSARNARLVAICQHVRSPQTEARVIEALASGIPTVTEALADHGLPPAHYVDSGIRFTVVLH
QFATAPPAATAEPPMGATERRVYQTLTRPGRTVSDLAEELGLSAPNIRKALRSLRGRGLILQLGGRGKATTYQRTDS

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51337; Mature: 51206

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQMIAFLRAAGGDTTEVEVKSAAGGLPASLTSTMSALANQPGGGTIILGLDERAGFRPV
CHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
ELSDPQMLKQGLAARARAFTPPVRLTIDDGEVDGATVVVAQVHECDRSTKPCRVTATGRA
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEHHHHCCCCCCEEEEECCCE
YLRGYDGDYALSDMEEQGFLAARQPPLFDRSPVEDATIDDLDTELVDTFLLAVRERDPAG
EEECCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
LGRFPDDTELLRRAGVTMEGGQPTVAGLLALGVHPQQWFPRYVIQAAAQPLPTDSAATRA
CCCCCCHHHHHHHCCCEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHC
RNQVTISGPVPRMLDAALLWARRTFDTAIVAEMDGSVRDRPIYPLVAFRELVANALIHRD
CCEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
LDHWSAGLAVEVRLLRDRLVVANPGGLYGITVDRLGRDAVTSARNARLVAICQHVRSPQT
HHHHCCCHHEEEEEHHCEEEEECCCCEEEEEHHHCCCHHHHHCCCCHHHHHHHHHCCCCH
EARVIEALASGIPTVTEALADHGLPPAHYVDSGIRFTVVLHQFATAPPAATAEPPMGATE
HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCHHH
RRVYQTLTRPGRTVSDLAEELGLSAPNIRKALRSLRGRGLILQLGGRGKATTYQRTDS
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SQMIAFLRAAGGDTTEVEVKSAAGGLPASLTSTMSALANQPGGGTIILGLDERAGFRPV
HHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
ELSDPQMLKQGLAARARAFTPPVRLTIDDGEVDGATVVVAQVHECDRSTKPCRVTATGRA
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEHHHHCCCCCCEEEEECCCE
YLRGYDGDYALSDMEEQGFLAARQPPLFDRSPVEDATIDDLDTELVDTFLLAVRERDPAG
EEECCCCCCCCCCHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
LGRFPDDTELLRRAGVTMEGGQPTVAGLLALGVHPQQWFPRYVIQAAAQPLPTDSAATRA
CCCCCCHHHHHHHCCCEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHC
RNQVTISGPVPRMLDAALLWARRTFDTAIVAEMDGSVRDRPIYPLVAFRELVANALIHRD
CCEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
LDHWSAGLAVEVRLLRDRLVVANPGGLYGITVDRLGRDAVTSARNARLVAICQHVRSPQT
HHHHCCCHHEEEEEHHCEEEEECCCCEEEEEHHHCCCHHHHHCCCCHHHHHHHHHCCCCH
EARVIEALASGIPTVTEALADHGLPPAHYVDSGIRFTVVLHQFATAPPAATAEPPMGATE
HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCHHH
RRVYQTLTRPGRTVSDLAEELGLSAPNIRKALRSLRGRGLILQLGGRGKATTYQRTDS
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA