Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315406

Identifier: 158315406

GI number: 158315406

Start: 4273555

End: 4274217

Strand: Reverse

Name: 158315406

Synonym: Franean1_3609

Alternate gene names: NA

Gene position: 4274217-4273555 (Counterclockwise)

Preceding gene: 158315407

Following gene: 158315403

Centisome position: 47.59

GC content: 68.78

Gene sequence:

>663_bases
ATGCAAAAAGACGAAGTCTGGCGGGCCATCGATACCCAGCGGCTACGGGTCGCGGTCCTGCTGGAAAAACTCACCGACGA
CGAGTGGCGCTCACCCTCGCTGTGCGACGGCTGGACGGTGCGCGATGTCGCGGCCCATCTGACAATGCAACAGACAGGGC
TGGGTGGGGCGCTTCGCATGGCCGCCCGGTCACCAGGCGGGATGAAGCGGGTGATCCGCTGCTCGGCGTGCCTGCGGGCG
GCCGCGCCGACCGAACAGATGATCGCAGGGATCCGCGGAATGGTCGGTTCGCGGAAACACAACGTGGGCGTCACCTACAG
GGAAACCCTTATCGACATCCTCGTGCACGGCCTGGACATCGCCGTTCCCCTCGATCGACCCCTCGAGATACCCCTCGACG
CCGCGGCGGTCGCCGCCGACCGGGTCTGGTCCGTTGTCTTCCCGACGTTCGGCTACCCCTTCTTTCCCCGGAAGCGGCTC
AGAGGGCTGCGGCTCACCGCGTCCGACGCGGACTGGGCCGCCGGCGAGGGGGCACCGGTCGACGGCCCGATGGACGCGAT
CCTGCTGCTGCTCACCGGCCGCGTCGCCGCGCTGTCACGGCTGTCCGGCGATGGTGTGCCCGCGCTCCAGGCAAGGCTCG
CGTCCACTCAGGAGCCGGGATGA

Upstream 100 bases:

>100_bases
TGGCGGGCCCAGTCGGTTCGCCTTATCTTCCTGCGCCGACGCATAGTCACGGCTGGGAAAATTCATCACGCATAAATTCA
TCACGCATCAAGGACGCACC

Downstream 100 bases:

>100_bases
CAACGGGAGCCGCGTCGGAGTCCGCGACGGATGGATCGAATCCGGCGCTGACCAGCTGCTGGCGGACCGCATGTGGAGGC
GCATCAACCGTCGTGATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRMAARSPGGMKRVIRCSACLRA
AAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDIAVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRL
RGLRLTASDADWAAGEGAPVDGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG

Sequences:

>Translated_220_residues
MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRMAARSPGGMKRVIRCSACLRA
AAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDIAVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRL
RGLRLTASDADWAAGEGAPVDGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG
>Mature_220_residues
MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRMAARSPGGMKRVIRCSACLRA
AAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDIAVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRL
RGLRLTASDADWAAGEGAPVDGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23760; Mature: 23760

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRM
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH
AARSPGGMKRVIRCSACLRAAAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDI
HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCE
AVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRLRGLRLTASDADWAAGEGAPV
EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCCCCCCCCCC
DGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKDEVWRAIDTQRLRVAVLLEKLTDDEWRSPSLCDGWTVRDVAAHLTMQQTGLGGALRM
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH
AARSPGGMKRVIRCSACLRAAAPTEQMIAGIRGMVGSRKHNVGVTYRETLIDILVHGLDI
HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCE
AVPLDRPLEIPLDAAAVAADRVWSVVFPTFGYPFFPRKRLRGLRLTASDADWAAGEGAPV
EECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCCCCCCCCCCC
DGPMDAILLLLTGRVAALSRLSGDGVPALQARLASTQEPG
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA