| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315359
Identifier: 158315359
GI number: 158315359
Start: 4225831
End: 4226103
Strand: Reverse
Name: 158315359
Synonym: Franean1_3561
Alternate gene names: NA
Gene position: 4226103-4225831 (Counterclockwise)
Preceding gene: 158315360
Following gene: 158315357
Centisome position: 47.05
GC content: 60.44
Gene sequence:
>273_bases GTGGTCCTACGACCAGGAGACGCAAGCTGCATACCTGGCGCCGGCCGAGGGATCGCGGCCGGACTGGAAGTTCAATGGTC GACACGAGCCGTTCCCAGCCAGTCACAGCTGCGTCCGGGAAAGCAGTTCGAACGCCGCCGGCCGACGTCCCTTGACCGAT CTCCTGCCACTACGCCTCGTAGTCGAGACTTGTCGGTGCGTCTGGGAATCGAATCAGACGATCAACACCCCGACCTGGAC ATCCTCTATTCGATCAACGATCAGATCTCGTAA
Upstream 100 bases:
>100_bases GGCGCACTACGACCAGGCCGTCACCGCGGGCCGCGGCACCGAGAACTGGACCGTTCTCTACGAGATACTCAAAGCTGGCA GCTGAGCAACGACCAGAACC
Downstream 100 bases:
>100_bases AACTTACCTATTTGCCCAGGTCAGGGCATTGTTACGCATCGTGGTGGGGCGGGTGGGGCTCGAACCCACGACCGACGGAT AATGAGACACGGTGGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MVLRPGDASCIPGAGRGIAAGLEVQWSTRAVPSQSQLRPGKQFERRRPTSLDRSPATTPRSRDLSVRLGIESDDQHPDLD ILYSINDQIS
Sequences:
>Translated_90_residues MVLRPGDASCIPGAGRGIAAGLEVQWSTRAVPSQSQLRPGKQFERRRPTSLDRSPATTPRSRDLSVRLGIESDDQHPDLD ILYSINDQIS >Mature_90_residues MVLRPGDASCIPGAGRGIAAGLEVQWSTRAVPSQSQLRPGKQFERRRPTSLDRSPATTPRSRDLSVRLGIESDDQHPDLD ILYSINDQIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9869; Mature: 9869
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLRPGDASCIPGAGRGIAAGLEVQWSTRAVPSQSQLRPGKQFERRRPTSLDRSPATTPR CEECCCCCCCCCCCCCCEECCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC SRDLSVRLGIESDDQHPDLDILYSINDQIS CCCEEEEECCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MVLRPGDASCIPGAGRGIAAGLEVQWSTRAVPSQSQLRPGKQFERRRPTSLDRSPATTPR CEECCCCCCCCCCCCCCEECCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC SRDLSVRLGIESDDQHPDLDILYSINDQIS CCCEEEEECCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA