Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315325

Identifier: 158315325

GI number: 158315325

Start: 4186376

End: 4187254

Strand: Direct

Name: 158315325

Synonym: Franean1_3526

Alternate gene names: NA

Gene position: 4186376-4187254 (Clockwise)

Preceding gene: 158315324

Following gene: 158315329

Centisome position: 46.61

GC content: 72.01

Gene sequence:

>879_bases
GTGCGCGTCCTCGTCACCGGCGACCAGAGCCCTGTGGGCATGGCGGTCACGGCCACCTTGACCACGGCTGGGCATCAGAT
CGTCGGGTTCGACCTCGTCGGCGGTCACGACGTCCGCGACACCGCCGCTGTCGAACGCGCCTGCGCAGGCTGCGACGCGG
TGGTGCACCTGGCCGCCGTCGACGAACCCGTCACCGACCCGGACCTGGCACGGTTCGGACCCGCCACCACCGGATCAGAC
AGGATGATCTTCGAGACCAACGTGCTCGGCACCGGCAACGTTCTGCGGGCAGCCGAACGCCACGGCCTGTCCCGGGTGAT
CCTGATGAGCAGCGTGCACGTGCTGGGATGCTTCGGCGGCCGCGGCGAACCCGCCTACCTTCCCCTCGACGACCAGCACC
CCGCGGCCCCCGTGGGGCCGTACGCCCTGTCGAAGTGGCTCGCCGAGCAGATGTGCGCGGCCACCACCACCGCGACCGGC
ATCGCCACGGTCTGCCTGCGCCCGCCGGGGGTGTTCACCGCGGCGACCTACGCCGGGATCCGGCGGGCCCGACGGGACAA
CCCCTCCTTCGAATGGTCCCCGATCTGGGAGTGCGGCGCCTTCCTCGACGTGCGCGACCTCGCCACCGCGGTCGAGCGTG
CGCTGACCGTCCCGCTGGCTGGCCATCACCGGCTCCTGCTGTGCGCCGCCGACATCTCCTCGGCCGAACACGGCTCCCGC
GAGCTGGTCGGACGGCTTCTTCCCGACGTGCCGTGGCGGGGCGGGGCCGAGTACGACGACGAACCGTTCCGGTCGCTGAT
CGACACCGCCGGCGCCCGTTCCCTACTGGGCTGGACGCCACACCACTGCTGGCGGCCGGCGTCGTCCGCGCACGAGTAA

Upstream 100 bases:

>100_bases
CCATCGGTTCGGTTACCGGTCGAGTCCGGCGGAGGCCTCGCGAGCCTGGCCGGCCCGAAATGGGTTCGCTGAGGCAGCGT
CCGAGTGGTTGGCTCACGCT

Downstream 100 bases:

>100_bases
CACCTCGCCCCCCGGCAGACCGGGCGTGCCTCCGAGGGGGAGCCCTCAAGAATCGCGCAGGGCCGGTCGAACAGGCCGTC
GGCGCACCCGAACCCGCCTC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; UDP-Galactose 4-Epimerase; NAD Dependent Epimerase/Dehydratase Family; Short-Chain Dehydrogenase; Epimerase/Dehydratase; Dehydratase/Oxidoreductase; Vegetative Cell Wall; NAD-Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRVLVTGDQSPVGMAVTATLTTAGHQIVGFDLVGGHDVRDTAAVERACAGCDAVVHLAAVDEPVTDPDLARFGPATTGSD
RMIFETNVLGTGNVLRAAERHGLSRVILMSSVHVLGCFGGRGEPAYLPLDDQHPAAPVGPYALSKWLAEQMCAATTTATG
IATVCLRPPGVFTAATYAGIRRARRDNPSFEWSPIWECGAFLDVRDLATAVERALTVPLAGHHRLLLCAADISSAEHGSR
ELVGRLLPDVPWRGGAEYDDEPFRSLIDTAGARSLLGWTPHHCWRPASSAHE

Sequences:

>Translated_292_residues
MRVLVTGDQSPVGMAVTATLTTAGHQIVGFDLVGGHDVRDTAAVERACAGCDAVVHLAAVDEPVTDPDLARFGPATTGSD
RMIFETNVLGTGNVLRAAERHGLSRVILMSSVHVLGCFGGRGEPAYLPLDDQHPAAPVGPYALSKWLAEQMCAATTTATG
IATVCLRPPGVFTAATYAGIRRARRDNPSFEWSPIWECGAFLDVRDLATAVERALTVPLAGHHRLLLCAADISSAEHGSR
ELVGRLLPDVPWRGGAEYDDEPFRSLIDTAGARSLLGWTPHHCWRPASSAHE
>Mature_292_residues
MRVLVTGDQSPVGMAVTATLTTAGHQIVGFDLVGGHDVRDTAAVERACAGCDAVVHLAAVDEPVTDPDLARFGPATTGSD
RMIFETNVLGTGNVLRAAERHGLSRVILMSSVHVLGCFGGRGEPAYLPLDDQHPAAPVGPYALSKWLAEQMCAATTTATG
IATVCLRPPGVFTAATYAGIRRARRDNPSFEWSPIWECGAFLDVRDLATAVERALTVPLAGHHRLLLCAADISSAEHGSR
ELVGRLLPDVPWRGGAEYDDEPFRSLIDTAGARSLLGWTPHHCWRPASSAHE

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31030; Mature: 31030

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVTGDQSPVGMAVTATLTTAGHQIVGFDLVGGHDVRDTAAVERACAGCDAVVHLAAV
CEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCHHHEEEHHC
DEPVTDPDLARFGPATTGSDRMIFETNVLGTGNVLRAAERHGLSRVILMSSVHVLGCFGG
CCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEHHHHCCCEEEEECC
RGEPAYLPLDDQHPAAPVGPYALSKWLAEQMCAATTTATGIATVCLRPPGVFTAATYAGI
CCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHH
RRARRDNPSFEWSPIWECGAFLDVRDLATAVERALTVPLAGHHRLLLCAADISSAEHGSR
HHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHH
ELVGRLLPDVPWRGGAEYDDEPFRSLIDTAGARSLLGWTPHHCWRPASSAHE
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MRVLVTGDQSPVGMAVTATLTTAGHQIVGFDLVGGHDVRDTAAVERACAGCDAVVHLAAV
CEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCHHHEEEHHC
DEPVTDPDLARFGPATTGSDRMIFETNVLGTGNVLRAAERHGLSRVILMSSVHVLGCFGG
CCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEHHHHCCCEEEEECC
RGEPAYLPLDDQHPAAPVGPYALSKWLAEQMCAATTTATGIATVCLRPPGVFTAATYAGI
CCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHH
RRARRDNPSFEWSPIWECGAFLDVRDLATAVERALTVPLAGHHRLLLCAADISSAEHGSR
HHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHH
ELVGRLLPDVPWRGGAEYDDEPFRSLIDTAGARSLLGWTPHHCWRPASSAHE
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA