| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315329
Identifier: 158315329
GI number: 158315329
Start: 4190493
End: 4191161
Strand: Direct
Name: 158315329
Synonym: Franean1_3530
Alternate gene names: NA
Gene position: 4190493-4191161 (Clockwise)
Preceding gene: 158315325
Following gene: 158315330
Centisome position: 46.65
GC content: 65.47
Gene sequence:
>669_bases ATGGCGGGGTGGGCATGGTGTCCTGTCCAGCTCCAGAAAGCAGGCACACCAATGACCACCATCAGCATCATCGGCTCGGG CAACATGGCCACCGCCATCGGCACCCGGGCGGCGAAGCACGGCCACACCATCGAGCTCATGAGCCGCAACACCGCCAAGG CTCAGGCACTTGCCGACCAGATCGGCAACGGAGCCACCGTCGGCACGTTCGGGGCAAGGCCGGCGGGTGACATCGTCATC GTCGCCGTCCTGTACACCGGCGCGGTTGAAGTGGTCGCGCACTACGGCGATGCGCTGTCCGGCAAGATCCTCGTCGACAT CACCAACCCGTTCAACGCCGACGTCACCGGACTCGTGACTACCGCGGGCGACTCGGTGTCCCAGCAGATTGCCGCCGCCG CCCCCGAGGGCACACACGTCGTGAAGGCATTCAATTCGATCTTCCGCGGCGTCCTTGCTGAAGACAAGCCCTTGGACGTG TTTTTCGCCGGCGACAGCACCGAGGCGAAGGCACGCGTCGCGGCGTTTCTGGAGAGCTTGGACATGCGGCCCCTCGACGC AGGAGGGCTCGAAATGGCTTACGTCCTTGAATGGGCCGGCATCCTCCTGGTGGGCCTGGCACGCAACGGCGCCGGCTTCG AGATCGCCTTGGGCGCCGAAGTCCTCTGA
Upstream 100 bases:
>100_bases ACATCGGGACTTGATGGCAGGGCCCAGAACCAGATGAACACTTCACGAATTGAGCCAGGCCCATCGCGTCATTCGACGGC ATCGACGACAACCATTAACA
Downstream 100 bases:
>100_bases AAATTCGGTGTACATAACATCGACATGGCAATCAGATGGAGTGGTCGTGGGAAAGCTTGATGGCAAGGTTGCGGTGATCA CAGGCGCGACAAGTGGTATG
Product: NADP oxidoreductase coenzyme F420-dependent
Products: NA
Alternate protein names: Reductase; NADPH-Dependent; Reduced Co; Oxidoreductase; NADp Oxidoreductase Co; Transmembrane Oxidoreductase; Transmemembrane Reductase Oxidoreductase Protein
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAGWAWCPVQLQKAGTPMTTISIIGSGNMATAIGTRAAKHGHTIELMSRNTAKAQALADQIGNGATVGTFGARPAGDIVI VAVLYTGAVEVVAHYGDALSGKILVDITNPFNADVTGLVTTAGDSVSQQIAAAAPEGTHVVKAFNSIFRGVLAEDKPLDV FFAGDSTEAKARVAAFLESLDMRPLDAGGLEMAYVLEWAGILLVGLARNGAGFEIALGAEVL
Sequences:
>Translated_222_residues MAGWAWCPVQLQKAGTPMTTISIIGSGNMATAIGTRAAKHGHTIELMSRNTAKAQALADQIGNGATVGTFGARPAGDIVI VAVLYTGAVEVVAHYGDALSGKILVDITNPFNADVTGLVTTAGDSVSQQIAAAAPEGTHVVKAFNSIFRGVLAEDKPLDV FFAGDSTEAKARVAAFLESLDMRPLDAGGLEMAYVLEWAGILLVGLARNGAGFEIALGAEVL >Mature_221_residues AGWAWCPVQLQKAGTPMTTISIIGSGNMATAIGTRAAKHGHTIELMSRNTAKAQALADQIGNGATVGTFGARPAGDIVIV AVLYTGAVEVVAHYGDALSGKILVDITNPFNADVTGLVTTAGDSVSQQIAAAAPEGTHVVKAFNSIFRGVLAEDKPLDVF FAGDSTEAKARVAAFLESLDMRPLDAGGLEMAYVLEWAGILLVGLARNGAGFEIALGAEVL
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI100815815, Length=192, Percent_Identity=28.6458333333333, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22780; Mature: 22649
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGWAWCPVQLQKAGTPMTTISIIGSGNMATAIGTRAAKHGHTIELMSRNTAKAQALADQ CCCCEECCEEEECCCCCEEEEEEEECCCEEEHHHHHHHCCCCEEEEECCCCHHHHHHHHH IGNGATVGTFGARPAGDIVIVAVLYTGAVEVVAHYGDALSGKILVDITNPFNADVTGLVT HCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEE TAGDSVSQQIAAAAPEGTHVVKAFNSIFRGVLAEDKPLDVFFAGDSTEAKARVAAFLESL ECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHC DMRPLDAGGLEMAYVLEWAGILLVGLARNGAGFEIALGAEVL CCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEECCCCC >Mature Secondary Structure AGWAWCPVQLQKAGTPMTTISIIGSGNMATAIGTRAAKHGHTIELMSRNTAKAQALADQ CCCEECCEEEECCCCCEEEEEEEECCCEEEHHHHHHHCCCCEEEEECCCCHHHHHHHHH IGNGATVGTFGARPAGDIVIVAVLYTGAVEVVAHYGDALSGKILVDITNPFNADVTGLVT HCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEE TAGDSVSQQIAAAAPEGTHVVKAFNSIFRGVLAEDKPLDVFFAGDSTEAKARVAAFLESL ECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHC DMRPLDAGGLEMAYVLEWAGILLVGLARNGAGFEIALGAEVL CCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA