Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315316

Identifier: 158315316

GI number: 158315316

Start: 4178365

End: 4178934

Strand: Reverse

Name: 158315316

Synonym: Franean1_3517

Alternate gene names: NA

Gene position: 4178934-4178365 (Counterclockwise)

Preceding gene: 158315317

Following gene: 158315315

Centisome position: 46.53

GC content: 70.7

Gene sequence:

>570_bases
ATGCGCACGGTGCCCCGGCACCTGTTCGTGCCCGACGCCGCGCCCAGCGAGGCGTACGCGGAGCAGGCGGTCATCACCAA
GCGCGCCCCTGACGGGGCAGCTTTGAGCTGTGCTTCCGCACCGGAGGTTGTGGCGATGCTGCTGGAGCAGCTCATCCTGT
CCGGCGTGGAGATCGGACCCTACGATCCGTTCGACGGGATCTGGCTGCGCCTGACCGCCACCGAGCCCGGCTGCTGCCGC
ATCGCGGCCACCCCTGAGGCCGTTGGCTCAATGCTGTGCGCACCCGCGATCGCCCAGCGCAGCCCCGCCCTCGCCGAAGA
GGACTCGCTCGCCGACCTCAGCCTGGCCCGCAACCACGCGGGACCCGGCCGGCACGTGCTCAGCGCGACCGGACACGGAC
CGGGCCGCCACGACCTCACCGACAGGCTGATCACCGCGATTCACACCTGGGACGGCGACCGCACGGCAATCCCGGTCGTG
ACGGCTTACCGCGGACTCACCGGCGCCCCGCACCACCAGCCGTCCGAACTGATCCTGAAGCCGGACAGCCCACTGAAGAT
CGCCTTCTGA

Upstream 100 bases:

>100_bases
CCCCCGACGCCACCCCCGACGAGCTGCGCGCGGCCATGGTCGACCGCCTCGCCGCCTCGCCGCCTCGGGAGCGGTCCTCA
CCAGTGTCGTCGAGGACGCG

Downstream 100 bases:

>100_bases
CAGGTGCCGCAAGTGAATCTCGGTGGCGTCGTGCTCGGCGAGGTGCTGCATGCGAGCGACAAGTCCCTGCTCGCGCTCGG
CGCCTGGCATGGCCTGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRTVPRHLFVPDAAPSEAYAEQAVITKRAPDGAALSCASAPEVVAMLLEQLILSGVEIGPYDPFDGIWLRLTATEPGCCR
IAATPEAVGSMLCAPAIAQRSPALAEEDSLADLSLARNHAGPGRHVLSATGHGPGRHDLTDRLITAIHTWDGDRTAIPVV
TAYRGLTGAPHHQPSELILKPDSPLKIAF

Sequences:

>Translated_189_residues
MRTVPRHLFVPDAAPSEAYAEQAVITKRAPDGAALSCASAPEVVAMLLEQLILSGVEIGPYDPFDGIWLRLTATEPGCCR
IAATPEAVGSMLCAPAIAQRSPALAEEDSLADLSLARNHAGPGRHVLSATGHGPGRHDLTDRLITAIHTWDGDRTAIPVV
TAYRGLTGAPHHQPSELILKPDSPLKIAF
>Mature_189_residues
MRTVPRHLFVPDAAPSEAYAEQAVITKRAPDGAALSCASAPEVVAMLLEQLILSGVEIGPYDPFDGIWLRLTATEPGCCR
IAATPEAVGSMLCAPAIAQRSPALAEEDSLADLSLARNHAGPGRHVLSATGHGPGRHDLTDRLITAIHTWDGDRTAIPVV
TAYRGLTGAPHHQPSELILKPDSPLKIAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19946; Mature: 19946

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVPRHLFVPDAAPSEAYAEQAVITKRAPDGAALSCASAPEVVAMLLEQLILSGVEIGP
CCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCC
YDPFDGIWLRLTATEPGCCRIAATPEAVGSMLCAPAIAQRSPALAEEDSLADLSLARNHA
CCCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
GPGRHVLSATGHGPGRHDLTDRLITAIHTWDGDRTAIPVVTAYRGLTGAPHHQPSELILK
CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCCCEEEC
PDSPLKIAF
CCCCEEECC
>Mature Secondary Structure
MRTVPRHLFVPDAAPSEAYAEQAVITKRAPDGAALSCASAPEVVAMLLEQLILSGVEIGP
CCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCC
YDPFDGIWLRLTATEPGCCRIAATPEAVGSMLCAPAIAQRSPALAEEDSLADLSLARNHA
CCCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
GPGRHVLSATGHGPGRHDLTDRLITAIHTWDGDRTAIPVVTAYRGLTGAPHHQPSELILK
CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCCCEEEC
PDSPLKIAF
CCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA