| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315285
Identifier: 158315285
GI number: 158315285
Start: 4143671
End: 4143904
Strand: Reverse
Name: 158315285
Synonym: Franean1_3485
Alternate gene names: NA
Gene position: 4143904-4143671 (Counterclockwise)
Preceding gene: 158315286
Following gene: 158315284
Centisome position: 46.14
GC content: 70.94
Gene sequence:
>234_bases GTGACCGTGAGAACCGTCGAGGACTTCGTCGCCCTGCTGCGCGACGAGCTCGCCCTGCCCGTCACCGCCGACGACCTCGA CCGGGATCTCGACTCCGTGGAGTCGTGGGACTCGGTCCAGCTGCTGGCGCTGTGCACGATCCTGGAGCGGGAGACCGGCC GCTCGCTCCCGCTGGCCGAGGTCCTAGAGGCCCCCAGCCTGGAGGCCGTCTACCAGCTGGCGGTGCGGTCGTGA
Upstream 100 bases:
>100_bases GCGCGGACGACGCCGGTGCCCGCTTCCGCCACGACCTTCGCGACCTGCCCGAGCCGCCGCCGCACGTCCGCCTGACCGCC CGCTTCGATGAGGACGCACC
Downstream 100 bases:
>100_bases CGGCGGGCACGCCGACGGCTCCCGCCGGCCCGCGCGCGGCTGCCGACGGCGGCCCGGCGGCGCCTCCCGCGTCCGGCACC GGCGCCGCCGGCGGCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MTVRTVEDFVALLRDELALPVTADDLDRDLDSVESWDSVQLLALCTILERETGRSLPLAEVLEAPSLEAVYQLAVRS
Sequences:
>Translated_77_residues MTVRTVEDFVALLRDELALPVTADDLDRDLDSVESWDSVQLLALCTILERETGRSLPLAEVLEAPSLEAVYQLAVRS >Mature_76_residues TVRTVEDFVALLRDELALPVTADDLDRDLDSVESWDSVQLLALCTILERETGRSLPLAEVLEAPSLEAVYQLAVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8544; Mature: 8413
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRTVEDFVALLRDELALPVTADDLDRDLDSVESWDSVQLLALCTILERETGRSLPLAE CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH VLEAPSLEAVYQLAVRS HHCCCCHHHHHHHHHCC >Mature Secondary Structure TVRTVEDFVALLRDELALPVTADDLDRDLDSVESWDSVQLLALCTILERETGRSLPLAE CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHH VLEAPSLEAVYQLAVRS HHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA