| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315284
Identifier: 158315284
GI number: 158315284
Start: 4142790
End: 4143674
Strand: Reverse
Name: 158315284
Synonym: Franean1_3484
Alternate gene names: NA
Gene position: 4143674-4142790 (Counterclockwise)
Preceding gene: 158315285
Following gene: 158315283
Centisome position: 46.13
GC content: 77.74
Gene sequence:
>885_bases GTGACGGCGGGCACGCCGACGGCTCCCGCCGGCCCGCGCGCGGCTGCCGACGGCGGCCCGGCGGCGCCTCCCGCGTCCGG CACCGGCGCCGCCGGCGGCGGGCCCGCGCTGGTGGCCGCCGGGCCCGCGCCGCTGCCCCGGCAGCGCCGCCACACCCAGT TCTTCCTGGCGACGGTGCGCGAGTTCTCCCCGGTGTTCCTGGACACCGAGGTGGACATGACCCGGGTGCTCGCCCACCGC GACGCGGCGCGGGCGCGCAGCGGGGTGCGCTACGCGACGAGCGCCTACGTGCTGCGGGCCGCCGGGCGCGTGCTGGCCCG CCACCCGGACGCCAACGCGGCGCTGCGCGGCGGACTGCGGACCCGGGTCGCCCACTACCCGTTCGTCCACGGCAAGCTGA CGCTGGACAAGGTCCTCGACGGGCGGCGGGTGGTCCTCGGCACCGTGGTGCCGAACCTGCACGAGGTGGGCCTGGCGGAG ATCCAGGCGCACCTGGAGCGGGTCCGCGACGGCGACCCGCAGCGGCTGCCCGACTTCGAGGGGATCCGCCGGCTGCACGC GGCGCCGTGGCTGGTGGGCCGGCTCCGGTTCCGCCGGGCCGCCCGGTCGCTGGCCCTGCGCCCGCACCTGACCGGCACCT TCGCCGTGACGTCGCTGGGCCACCGGGCGGTCGACTCCTTCCAGTCGGTCGGCGGCACGACCACGACCTTCGGCGTCGGG CGCGTCCTGCCCCGGGCGGTGGTGCGTGACGGCGAGCTCGCCGTGGCCCCGGTGCTGCGACTCAGCCTCTCCTTCGACCA CCGGGCGATCGACGGCGCCCAGGCCGCCGACGTGCTGACCGAGGTCAAGGAAGCCCTGGAACGGGACGATCTGGAGCAGA CGTGA
Upstream 100 bases:
>100_bases TGTGCACGATCCTGGAGCGGGAGACCGGCCGCTCGCTCCCGCTGGCCGAGGTCCTAGAGGCCCCCAGCCTGGAGGCCGTC TACCAGCTGGCGGTGCGGTC
Downstream 100 bases:
>100_bases ACGATCTCGCCGAGCTGAAGACCTTCGTCGTGGCACACGCGGTGTCGCAGGGGCTGCCCACCGGGCACTACGACCCGCTG CTGGCCCGCATCCACCATGA
Product: dehydrogenase catalytic domain-containing protein
Products: NA
Alternate protein names: 2-Oxo Acid Dehydrogenases Acyltransferase; Acyltransferase
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTAGTPTAPAGPRAAADGGPAAPPASGTGAAGGGPALVAAGPAPLPRQRRHTQFFLATVREFSPVFLDTEVDMTRVLAHR DAARARSGVRYATSAYVLRAAGRVLARHPDANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAE IQAHLERVRDGDPQRLPDFEGIRRLHAAPWLVGRLRFRRAARSLALRPHLTGTFAVTSLGHRAVDSFQSVGGTTTTFGVG RVLPRAVVRDGELAVAPVLRLSLSFDHRAIDGAQAADVLTEVKEALERDDLEQT
Sequences:
>Translated_294_residues MTAGTPTAPAGPRAAADGGPAAPPASGTGAAGGGPALVAAGPAPLPRQRRHTQFFLATVREFSPVFLDTEVDMTRVLAHR DAARARSGVRYATSAYVLRAAGRVLARHPDANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAE IQAHLERVRDGDPQRLPDFEGIRRLHAAPWLVGRLRFRRAARSLALRPHLTGTFAVTSLGHRAVDSFQSVGGTTTTFGVG RVLPRAVVRDGELAVAPVLRLSLSFDHRAIDGAQAADVLTEVKEALERDDLEQT >Mature_293_residues TAGTPTAPAGPRAAADGGPAAPPASGTGAAGGGPALVAAGPAPLPRQRRHTQFFLATVREFSPVFLDTEVDMTRVLAHRD AARARSGVRYATSAYVLRAAGRVLARHPDANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAEI QAHLERVRDGDPQRLPDFEGIRRLHAAPWLVGRLRFRRAARSLALRPHLTGTFAVTSLGHRAVDSFQSVGGTTTTFGVGR VLPRAVVRDGELAVAPVLRLSLSFDHRAIDGAQAADVLTEVKEALERDDLEQT
Specific function: Unknown
COG id: COG0508
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31289; Mature: 31158
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGTPTAPAGPRAAADGGPAAPPASGTGAAGGGPALVAAGPAPLPRQRRHTQFFLATVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH EFSPVFLDTEVDMTRVLAHRDAARARSGVRYATSAYVLRAAGRVLARHPDANAALRGGLR HCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHH TRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAEIQAHLERVRDGDPQRLPDFE HHHHHCCEECCCEEHHHHCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH GIRRLHAAPWLVGRLRFRRAARSLALRPHLTGTFAVTSLGHRAVDSFQSVGGTTTTFGVG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RVLPRAVVRDGELAVAPVLRLSLSFDHRAIDGAQAADVLTEVKEALERDDLEQT HHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAGTPTAPAGPRAAADGGPAAPPASGTGAAGGGPALVAAGPAPLPRQRRHTQFFLATVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH EFSPVFLDTEVDMTRVLAHRDAARARSGVRYATSAYVLRAAGRVLARHPDANAALRGGLR HCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHH TRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAEIQAHLERVRDGDPQRLPDFE HHHHHCCEECCCEEHHHHCCCCEEEEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH GIRRLHAAPWLVGRLRFRRAARSLALRPHLTGTFAVTSLGHRAVDSFQSVGGTTTTFGVG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RVLPRAVVRDGELAVAPVLRLSLSFDHRAIDGAQAADVLTEVKEALERDDLEQT HHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA