| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315256
Identifier: 158315256
GI number: 158315256
Start: 4086209
End: 4086457
Strand: Reverse
Name: 158315256
Synonym: Franean1_3456
Alternate gene names: NA
Gene position: 4086457-4086209 (Counterclockwise)
Preceding gene: 158315259
Following gene: 158315254
Centisome position: 45.5
GC content: 67.87
Gene sequence:
>249_bases GTGGCCGGCAGGGGAACCGTCTTCATCAGCCATACCTCTGATATGGCCGCGTTCCCGCGGGACCGGTCCTTTGTCCAGGC CGCGGTCGAGGCGGTGTTACGAGCCGAAGCGCGCCCGGTCGACATGGCACAGTTCGCCGCGCGCGGGCAGCCGCCGGCGG AGTACTGCCAACAACAGGTCCGGAAAAGGGAAGGAGCAGACCGGTCGGCAGGACAGGTTCGTCGCGGACCCGCGGGAACG GTACCGTAA
Upstream 100 bases:
>100_bases CTCCTTCCGGAGGCTCTCCCTACGCTGAATCCGATCGGCCGGTAGAACTCTTCACCTTCCATCTGTCGAACCATGGCAAC TCCCGGAGTAGCGTGCGGGT
Downstream 100 bases:
>100_bases TGTTGACGTTGTCGTCGACAACACCGGGGAGTTCGCCCGCCGCCGTGCCCGTGACATCGTCCAGCGGCGTCTCGCCGAGT TCGCGGACTCATCCCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MAGRGTVFISHTSDMAAFPRDRSFVQAAVEAVLRAEARPVDMAQFAARGQPPAEYCQQQVRKREGADRSAGQVRRGPAGT VP
Sequences:
>Translated_82_residues MAGRGTVFISHTSDMAAFPRDRSFVQAAVEAVLRAEARPVDMAQFAARGQPPAEYCQQQVRKREGADRSAGQVRRGPAGT VP >Mature_81_residues AGRGTVFISHTSDMAAFPRDRSFVQAAVEAVLRAEARPVDMAQFAARGQPPAEYCQQQVRKREGADRSAGQVRRGPAGTV P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8843; Mature: 8712
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRGTVFISHTSDMAAFPRDRSFVQAAVEAVLRAEARPVDMAQFAARGQPPAEYCQQQV CCCCCCEEEECCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHH RKREGADRSAGQVRRGPAGTVP HHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGRGTVFISHTSDMAAFPRDRSFVQAAVEAVLRAEARPVDMAQFAARGQPPAEYCQQQV CCCCCEEEECCCCCHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHH RKREGADRSAGQVRRGPAGTVP HHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA