| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mdmB [H]
Identifier: 158315259
GI number: 158315259
Start: 4088506
End: 4089768
Strand: Reverse
Name: mdmB [H]
Synonym: Franean1_3459
Alternate gene names: 158315259
Gene position: 4089768-4088506 (Counterclockwise)
Preceding gene: 158315260
Following gene: 158315256
Centisome position: 45.53
GC content: 67.14
Gene sequence:
>1263_bases ATGCGTCACACCCCTTCGGTGCCCGTACTGCCTTCACTGACCGGCATCCGGGCTCCGGCCGCACTGCTGGTCTTCCTCTT CCACGCCCAGTGGGAGAACCATTACATCGGTGGCGGGACCGGTGACACGATCTCCGACATCATCGACCGCGGCGGAACAT GGGGGCTGGGCCTCTTCTTCGCGCTGAGCGGCTTCGTCCTCACCTGGACGGCGAGCGCCAACGACACCGTGGTGGGCTTC TGGCGCCGGCGCGTCGTCAAGGTGTTCCCGAACCACCTGGTGACCTACGCCCTGGCCGTGGTCATCCTGCTCTCCAGCTC ACAGGCCATCCCCCTCGACCACTGGCTGCCCAACCTGTTCCTGGTCCAGACCTGGGTGCCGGACGTCGCCCGGGTGGTGT CGCTGAACGGCGTCTCCTGGTCGCTGTCCGCCGAGCTCTTCTTCTACCTCTCGTTCCCGTTCCTGCTGATGACCGTCAAC CGGATCAGGGACGAGCGGCTCTGGCTCAGCACCGGCGTCGTGGCCGCGCTGATCGTCGGGGCGACCTTCTTCTCGTACTA CGTGCTGTCCGACCAGCCGCGGCTGATCGGGTTCGGCGGCGACGACTACTCCTACAACCAGATCTGGTTCATCTGGTTCT TCCCCCCGGTCAGGGGGCTGGAGTTCGTCCTCGGCGTGCTGCTCGCGAAGCTCGTGCTCGCCGGCCGCTGGCGGCCGATC GGCCTGCCGGCCGCGGTCGGGCTCTCCTTCGCGGGCTACCTCGTGTCGACCTTCGCGGTGCCCTACCTGTTCGGGGTCAG CGGCGTCGCGACCCTGTGGACCGCCCCGCTGCTCGCCGAGCTCGCCCTGGCCGACGTCGAGAAGAAGCGCTCATGGGTAC GTCATCCGGTGCTGGTCTGGTTCGGCAACCTCTCCTTCGCCTTCTACATGATCCACTGGCTGGTCATCGGCCGCGTCACC CACTGGGCACGGCCTGACCCCTCCCGGCCGGTCGTGGACGGCCTCGGGCTGATCCTGCTGACGTTCGTCGTCTCGCTGTT CCTGGCCTGGCTGATGCACAACTTCATCGAGATGCCCGCCGTCCGGCGCTTCAGCGGTACCCGCCCGCGGTCCGTAACGG TGCGTGCGTACCCGCACGTAACGGTGCCCGCGCCGAGCACATCGATTCCCAGCACAGCGGTCCCGAACACAGCGGTTCCA AACACAACGGTTCCGAACGCACCGATTCCGAACGCAACGGCGGAGTCGACCGGGGTCGCCTGA
Upstream 100 bases:
>100_bases TCCCATCAGCCACCCGGACGCCCGCGGGCAGTGTCGAGCCAGGTTCAGGGGGCTTCCTCGACGCTGTGTTGCCGGGCCGC GAAAGGCACGTGATACGCGC
Downstream 100 bases:
>100_bases CCTCGCCCAGAACAGTGCGGCCCCTAGGCGCGGCGTAGCGCCCGACCCAGCCCGGCTGGATCGGGCGCTACGCCGGCCCG GTAGTTCAGGCCGGCCCGGT
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MRHTPSVPVLPSLTGIRAPAALLVFLFHAQWENHYIGGGTGDTISDIIDRGGTWGLGLFFALSGFVLTWTASANDTVVGF WRRRVVKVFPNHLVTYALAVVILLSSSQAIPLDHWLPNLFLVQTWVPDVARVVSLNGVSWSLSAELFFYLSFPFLLMTVN RIRDERLWLSTGVVAALIVGATFFSYYVLSDQPRLIGFGGDDYSYNQIWFIWFFPPVRGLEFVLGVLLAKLVLAGRWRPI GLPAAVGLSFAGYLVSTFAVPYLFGVSGVATLWTAPLLAELALADVEKKRSWVRHPVLVWFGNLSFAFYMIHWLVIGRVT HWARPDPSRPVVDGLGLILLTFVVSLFLAWLMHNFIEMPAVRRFSGTRPRSVTVRAYPHVTVPAPSTSIPSTAVPNTAVP NTTVPNAPIPNATAESTGVA
Sequences:
>Translated_420_residues MRHTPSVPVLPSLTGIRAPAALLVFLFHAQWENHYIGGGTGDTISDIIDRGGTWGLGLFFALSGFVLTWTASANDTVVGF WRRRVVKVFPNHLVTYALAVVILLSSSQAIPLDHWLPNLFLVQTWVPDVARVVSLNGVSWSLSAELFFYLSFPFLLMTVN RIRDERLWLSTGVVAALIVGATFFSYYVLSDQPRLIGFGGDDYSYNQIWFIWFFPPVRGLEFVLGVLLAKLVLAGRWRPI GLPAAVGLSFAGYLVSTFAVPYLFGVSGVATLWTAPLLAELALADVEKKRSWVRHPVLVWFGNLSFAFYMIHWLVIGRVT HWARPDPSRPVVDGLGLILLTFVVSLFLAWLMHNFIEMPAVRRFSGTRPRSVTVRAYPHVTVPAPSTSIPSTAVPNTAVP NTTVPNAPIPNATAESTGVA >Mature_420_residues MRHTPSVPVLPSLTGIRAPAALLVFLFHAQWENHYIGGGTGDTISDIIDRGGTWGLGLFFALSGFVLTWTASANDTVVGF WRRRVVKVFPNHLVTYALAVVILLSSSQAIPLDHWLPNLFLVQTWVPDVARVVSLNGVSWSLSAELFFYLSFPFLLMTVN RIRDERLWLSTGVVAALIVGATFFSYYVLSDQPRLIGFGGDDYSYNQIWFIWFFPPVRGLEFVLGVLLAKLVLAGRWRPI GLPAAVGLSFAGYLVSTFAVPYLFGVSGVATLWTAPLLAELALADVEKKRSWVRHPVLVWFGNLSFAFYMIHWLVIGRVT HWARPDPSRPVVDGLGLILLTFVVSLFLAWLMHNFIEMPAVRRFSGTRPRSVTVRAYPHVTVPAPSTSIPSTAVPNTAVP NTTVPNAPIPNATAESTGVA
Specific function: Catalyzes the acylation of the mycaminose sugar during midecamycin biosynthesis [H]
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 46315; Mature: 46315
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHTPSVPVLPSLTGIRAPAALLVFLFHAQWENHYIGGGTGDTISDIIDRGGTWGLGLFF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH ALSGFVLTWTASANDTVVGFWRRRVVKVFPNHLVTYALAVVILLSSSQAIPLDHWLPNLF HHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCE LVQTWVPDVARVVSLNGVSWSLSAELFFYLSFPFLLMTVNRIRDERLWLSTGVVAALIVG EHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATFFSYYVLSDQPRLIGFGGDDYSYNQIWFIWFFPPVRGLEFVLGVLLAKLVLAGRWRPI HHHHHHEEECCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC GLPAAVGLSFAGYLVSTFAVPYLFGVSGVATLWTAPLLAELALADVEKKRSWVRHPVLVW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FGNLSFAFYMIHWLVIGRVTHWARPDPSRPVVDGLGLILLTFVVSLFLAWLMHNFIEMPA ECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VRRFSGTRPRSVTVRAYPHVTVPAPSTSIPSTAVPNTAVPNTTVPNAPIPNATAESTGVA HHHHCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHTPSVPVLPSLTGIRAPAALLVFLFHAQWENHYIGGGTGDTISDIIDRGGTWGLGLFF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH ALSGFVLTWTASANDTVVGFWRRRVVKVFPNHLVTYALAVVILLSSSQAIPLDHWLPNLF HHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCE LVQTWVPDVARVVSLNGVSWSLSAELFFYLSFPFLLMTVNRIRDERLWLSTGVVAALIVG EHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATFFSYYVLSDQPRLIGFGGDDYSYNQIWFIWFFPPVRGLEFVLGVLLAKLVLAGRWRPI HHHHHHEEECCCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC GLPAAVGLSFAGYLVSTFAVPYLFGVSGVATLWTAPLLAELALADVEKKRSWVRHPVLVW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE FGNLSFAFYMIHWLVIGRVTHWARPDPSRPVVDGLGLILLTFVVSLFLAWLMHNFIEMPA ECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VRRFSGTRPRSVTVRAYPHVTVPAPSTSIPSTAVPNTAVPNTTVPNAPIPNATAESTGVA HHHHCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1629172 [H]