| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315217
Identifier: 158315217
GI number: 158315217
Start: 4047007
End: 4047225
Strand: Direct
Name: 158315217
Synonym: Franean1_3417
Alternate gene names: NA
Gene position: 4047007-4047225 (Clockwise)
Preceding gene: 158315216
Following gene: 158315219
Centisome position: 45.06
GC content: 62.1
Gene sequence:
>219_bases TTGAACAGGAAGGAATCTAGGAAAAGCCACTTTGAAAATGCTCACCGCATCGTCATCACCCGGCTGCGCTGCGACCCCCG CACCCGCGCCTACCAGCAACGACGCCTCGCCGAAGGCAAAACCCCTCGCGAGATCGTCCGCTGCCTCAAGCGCTACATCG CCCGCGAAATCTACAACGCCATCCCGCACACCAGCCCACCGGCCACCGCGGCTACTTGA
Upstream 100 bases:
>100_bases GGCGAGCGCGGGTTCGCGGTACTGAAGAACTGGCGGATCCTCAACCGCTTCCGCAGCTGCCCACGCCGCGTCGGCAAGTT CGCCCAAGCCGTCCTCGTCC
Downstream 100 bases:
>100_bases CAATACAGGGGCGTCAGTGCCGCTGCTCTGCCAGCTCACGGTCCGCCGCTGAGAACGTAGGGCGCGACCCGATCGTCGTC AGTGCGCAGGTATACAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MNRKESRKSHFENAHRIVITRLRCDPRTRAYQQRRLAEGKTPREIVRCLKRYIAREIYNAIPHTSPPATAAT
Sequences:
>Translated_72_residues MNRKESRKSHFENAHRIVITRLRCDPRTRAYQQRRLAEGKTPREIVRCLKRYIAREIYNAIPHTSPPATAAT >Mature_72_residues MNRKESRKSHFENAHRIVITRLRCDPRTRAYQQRRLAEGKTPREIVRCLKRYIAREIYNAIPHTSPPATAAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8502; Mature: 8502
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKESRKSHFENAHRIVITRLRCDPRTRAYQQRRLAEGKTPREIVRCLKRYIAREIYNA CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IPHTSPPATAAT CCCCCCCCCCCC >Mature Secondary Structure MNRKESRKSHFENAHRIVITRLRCDPRTRAYQQRRLAEGKTPREIVRCLKRYIAREIYNA CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IPHTSPPATAAT CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA