| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yajO [H]
Identifier: 158315178
GI number: 158315178
Start: 4003346
End: 4004359
Strand: Direct
Name: yajO [H]
Synonym: Franean1_3378
Alternate gene names: 158315178
Gene position: 4003346-4004359 (Clockwise)
Preceding gene: 158315177
Following gene: 158315179
Centisome position: 44.57
GC content: 65.09
Gene sequence:
>1014_bases GTGTTGGATGAGGACATGGAGTACACCCGGCTGGGATCATCAGGATTGAAGGTCAGCCGCATCGCGCTCGGCTGCATGAG CTTTGGTAAGCCCAACACCGGGCGGGGCTGGGCGCTCGACACGGATGCGGCGGAGCCGCTCTTCCGGCAGGCGGTCGAGC TCGGCATCACGCTCTGGGACACCGCGAACATCTACGGTGTGGGCACCTCCGAGGAGATCACCGGAGAGGCGATCGGGCGC TACACGAGCCGTGACCAGGTCGTCATTGCCACAAAGCTGTTCGCCCCGATGAGTCAGGGGCCTGGCGGAGGCGGTCTTTC CCGCCGCGCGGTGTTCGAGCAGATCGACGCCTCCCTGCGCCGCCTCGGCACCGACTATGTCGACCTGTACCAGATCCACA GGTTCGATCCGGAGACGCCGGTCGAGGAGACAATGGAAGCTCTCCACGACATCGTGAAGGCGGGGAAGGTTCGCTATCTG GGCGCCTCGTCGATGTGGGCCTGGCAGTTCTCCAAGATGCAGTACACCGCTGAGCTGCACGGCTGGACCAAATTCATTTC GATGCAGGATCAGTACAGTCTTGTGGCGCGCGAGGAGGAGCGCGAGATGTTCGGGCTGCTCGCCGACCAGGGCGTGGGCA GCCTTCCGTGGAGCCCGCTCGCCGCGGGACTCCTCACCCGGCCGTGGGGTGATGTGAGCACGACTCGTGGGTCGTCCAAT CCGACGACCGACGGATCGGGCAGGCCCCTTTTCTTCGACAGCGACCGAGGCACGGTCGACGCGGTGCAGCAGATCGCGGA GACGCGAGGCGTCTCCATGGCACAGATCGCGATGGCCTGGGTGCTGAAGAATCCCGTCGTCACCGCGCCGATCGTCGGCG CGACGAAACCACACCACCTGGCGGACGCGGTCGCTGCCCTGGACATCGACCTCAGCGACAAGGAAGTAGCCGCGCTCGAG GAGCACTACTCCCCGCGTCAGCCTACCTACTACGGGTCGAAGTCCGGTTACTGA
Upstream 100 bases:
>100_bases GCACGGTACACCGGATTTTCCGCCTGTATATCAAGGAAAAATCTCGCTTCCGGTCAGGCTGGGGGGCACTGGCAGTGCCT CCCAGCAGCGGTGGGTACCG
Downstream 100 bases:
>100_bases TCCCGCGGGCGACCTGACCCTGTGGGCATCGACACGTCGTCCGCCGCCCTGGCCCCGGCCGATGTCTACCGGATCGTGGA AGCCGACCCGTATCCCGCGA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MLDEDMEYTRLGSSGLKVSRIALGCMSFGKPNTGRGWALDTDAAEPLFRQAVELGITLWDTANIYGVGTSEEITGEAIGR YTSRDQVVIATKLFAPMSQGPGGGGLSRRAVFEQIDASLRRLGTDYVDLYQIHRFDPETPVEETMEALHDIVKAGKVRYL GASSMWAWQFSKMQYTAELHGWTKFISMQDQYSLVAREEEREMFGLLADQGVGSLPWSPLAAGLLTRPWGDVSTTRGSSN PTTDGSGRPLFFDSDRGTVDAVQQIAETRGVSMAQIAMAWVLKNPVVTAPIVGATKPHHLADAVAALDIDLSDKEVAALE EHYSPRQPTYYGSKSGY
Sequences:
>Translated_337_residues MLDEDMEYTRLGSSGLKVSRIALGCMSFGKPNTGRGWALDTDAAEPLFRQAVELGITLWDTANIYGVGTSEEITGEAIGR YTSRDQVVIATKLFAPMSQGPGGGGLSRRAVFEQIDASLRRLGTDYVDLYQIHRFDPETPVEETMEALHDIVKAGKVRYL GASSMWAWQFSKMQYTAELHGWTKFISMQDQYSLVAREEEREMFGLLADQGVGSLPWSPLAAGLLTRPWGDVSTTRGSSN PTTDGSGRPLFFDSDRGTVDAVQQIAETRGVSMAQIAMAWVLKNPVVTAPIVGATKPHHLADAVAALDIDLSDKEVAALE EHYSPRQPTYYGSKSGY >Mature_337_residues MLDEDMEYTRLGSSGLKVSRIALGCMSFGKPNTGRGWALDTDAAEPLFRQAVELGITLWDTANIYGVGTSEEITGEAIGR YTSRDQVVIATKLFAPMSQGPGGGGLSRRAVFEQIDASLRRLGTDYVDLYQIHRFDPETPVEETMEALHDIVKAGKVRYL GASSMWAWQFSKMQYTAELHGWTKFISMQDQYSLVAREEEREMFGLLADQGVGSLPWSPLAAGLLTRPWGDVSTTRGSSN PTTDGSGRPLFFDSDRGTVDAVQQIAETRGVSMAQIAMAWVLKNPVVTAPIVGATKPHHLADAVAALDIDLSDKEVAALE EHYSPRQPTYYGSKSGY
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=311, Percent_Identity=32.1543408360129, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI4504825, Length=309, Percent_Identity=31.7152103559871, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI27436964, Length=311, Percent_Identity=30.5466237942122, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI27436962, Length=311, Percent_Identity=30.5466237942122, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI27436966, Length=311, Percent_Identity=30.2250803858521, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI27436971, Length=318, Percent_Identity=30.188679245283, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI223718702, Length=205, Percent_Identity=34.6341463414634, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI41152114, Length=205, Percent_Identity=33.6585365853659, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI41327764, Length=176, Percent_Identity=34.6590909090909, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI223718708, Length=161, Percent_Identity=34.1614906832298, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=45.9876543209877, Blast_Score=301, Evalue=5e-83, Organism=Escherichia coli, GI1789375, Length=328, Percent_Identity=34.1463414634146, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=29.971181556196, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1788070, Length=335, Percent_Identity=30.1492537313433, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1788081, Length=306, Percent_Identity=29.4117647058824, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787674, Length=310, Percent_Identity=23.8709677419355, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=338, Percent_Identity=38.4615384615385, Blast_Score=239, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6323998, Length=322, Percent_Identity=30.7453416149068, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=30.4794520547945, Blast_Score=126, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6319951, Length=322, Percent_Identity=28.8819875776398, Blast_Score=119, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6322615, Length=251, Percent_Identity=30.6772908366534, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6321052, Length=162, Percent_Identity=32.7160493827161, Blast_Score=76, Evalue=9e-15, Organism=Drosophila melanogaster, GI24646155, Length=324, Percent_Identity=28.0864197530864, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24640980, Length=331, Percent_Identity=28.0966767371601, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI45549126, Length=331, Percent_Identity=28.0966767371601, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI24646159, Length=290, Percent_Identity=28.6206896551724, Blast_Score=85, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36854; Mature: 36854
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDEDMEYTRLGSSGLKVSRIALGCMSFGKPNTGRGWALDTDAAEPLFRQAVELGITLWD CCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCEEEEE TANIYGVGTSEEITGEAIGRYTSRDQVVIATKLFAPMSQGPGGGGLSRRAVFEQIDASLR CCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHH RLGTDYVDLYQIHRFDPETPVEETMEALHDIVKAGKVRYLGASSMWAWQFSKMQYTAELH HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHHHEEHHHHH GWTKFISMQDQYSLVAREEEREMFGLLADQGVGSLPWSPLAAGLLTRPWGDVSTTRGSSN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC PTTDGSGRPLFFDSDRGTVDAVQQIAETRGVSMAQIAMAWVLKNPVVTAPIVGATKPHHL CCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHH ADAVAALDIDLSDKEVAALEEHYSPRQPTYYGSKSGY HHHHHHEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLDEDMEYTRLGSSGLKVSRIALGCMSFGKPNTGRGWALDTDAAEPLFRQAVELGITLWD CCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCEEEEE TANIYGVGTSEEITGEAIGRYTSRDQVVIATKLFAPMSQGPGGGGLSRRAVFEQIDASLR CCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHH RLGTDYVDLYQIHRFDPETPVEETMEALHDIVKAGKVRYLGASSMWAWQFSKMQYTAELH HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEHHHHEEHHHHH GWTKFISMQDQYSLVAREEEREMFGLLADQGVGSLPWSPLAAGLLTRPWGDVSTTRGSSN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC PTTDGSGRPLFFDSDRGTVDAVQQIAETRGVSMAQIAMAWVLKNPVVTAPIVGATKPHHL CCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHH ADAVAALDIDLSDKEVAALEEHYSPRQPTYYGSKSGY HHHHHHEECCCCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]