| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315145
Identifier: 158315145
GI number: 158315145
Start: 3957886
End: 3958290
Strand: Direct
Name: 158315145
Synonym: Franean1_3344
Alternate gene names: NA
Gene position: 3957886-3958290 (Clockwise)
Preceding gene: 158315143
Following gene: 158315146
Centisome position: 44.06
GC content: 73.09
Gene sequence:
>405_bases GTGCTGCTGACCCGCCTGTCGCGGCTCGTCCACCGGGCCAGCACGCCCGACCTGCTCGGGATCAGCCTCAAGGACATGGC GGCCCTGGCCTACCTGCGCGATCACGCCGGCACCACCCAGCAGGCCCTGACCGAAGGCCTGTGCATCGACGCCAACTACT GCGTCCTGCTGCTCAACGAGCTGGAGGCCGCCGGCCTGGCCGAGCGGCGCCGCGACCCGGCGGACCGCCGCCGCCATCTC GTCACGATGACCGAGACCGGCCGCGAGGCGCTCGAACGGGCCGAGCAGGCTCAGGAGAGCGTCGAGGACGAGATCCTCGC CGGCCTCAGCCGGGAGGAACGGGTCACCCTCGCCCGCCTGCTGGGCCAGGCGCTCGACGGCGCCATCCGCCGGCCCAACC TGTAA
Upstream 100 bases:
>100_bases CATCGATAATCACGTAAGGTTAATCATCACGGATCAGTGATGATGTCGATGCCGCTACTATAGTTCGATGCCGGAAGCCA CCTCAACCACGGGGCCGATC
Downstream 100 bases:
>100_bases AGGAGGCCGAGGTGGCGCCCACGGACCAGGCCCGCCGCAACCACGACGTGCTGTTCCCCGACCACGTCTTCACGCTGGCG GTGACCGACCCCGAGCTCAT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MLLTRLSRLVHRASTPDLLGISLKDMAALAYLRDHAGTTQQALTEGLCIDANYCVLLLNELEAAGLAERRRDPADRRRHL VTMTETGREALERAEQAQESVEDEILAGLSREERVTLARLLGQALDGAIRRPNL
Sequences:
>Translated_134_residues MLLTRLSRLVHRASTPDLLGISLKDMAALAYLRDHAGTTQQALTEGLCIDANYCVLLLNELEAAGLAERRRDPADRRRHL VTMTETGREALERAEQAQESVEDEILAGLSREERVTLARLLGQALDGAIRRPNL >Mature_134_residues MLLTRLSRLVHRASTPDLLGISLKDMAALAYLRDHAGTTQQALTEGLCIDANYCVLLLNELEAAGLAERRRDPADRRRHL VTMTETGREALERAEQAQESVEDEILAGLSREERVTLARLLGQALDGAIRRPNL
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14871; Mature: 14871
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTRLSRLVHRASTPDLLGISLKDMAALAYLRDHAGTTQQALTEGLCIDANYCVLLLNE CHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHH LEAAGLAERRRDPADRRRHLVTMTETGREALERAEQAQESVEDEILAGLSREERVTLARL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LGQALDGAIRRPNL HHHHHHHHHCCCCC >Mature Secondary Structure MLLTRLSRLVHRASTPDLLGISLKDMAALAYLRDHAGTTQQALTEGLCIDANYCVLLLNE CHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHH LEAAGLAERRRDPADRRRHLVTMTETGREALERAEQAQESVEDEILAGLSREERVTLARL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LGQALDGAIRRPNL HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA