| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315146
Identifier: 158315146
GI number: 158315146
Start: 3958514
End: 3958723
Strand: Direct
Name: 158315146
Synonym: Franean1_3346
Alternate gene names: NA
Gene position: 3958514-3958723 (Clockwise)
Preceding gene: 158315145
Following gene: 158315150
Centisome position: 44.07
GC content: 70.95
Gene sequence:
>210_bases ATGCTCGGCGCGGCGCTCACCGCCGGTGTCAGCCCCGTCGAGGCCAAGGAGATCGTCTACCAGGCCGTGCCGTACGTCGG GCTGGCGAAGGTGTTCGACTTCCTCCACGCCACCAACGACGTTCTGACCGAACGCGGCGTCAGCCTGCCGCCACCCGGCC AGTCGACGACGACCACGGACACCCGCGCCGCGCGTGGGCTGGCGGTGTAG
Upstream 100 bases:
>100_bases TCGACGAGGTCCTCGCCGAGAGCCGTCTCGACGTCCGCACCCGGCCCATGGTCCAGCTTGCGGCGATGATCGCCTGCCAG GCGCTGCCGAGTACCGGGTC
Downstream 100 bases:
>100_bases AAGCAGATCATCGGCGACGACGCCGTGGACGCCCTGTACGCGGGTGCGCCCGCGGACGAGCAGCACATCCAGCGGTTCCT GTCGGCCAACTGCTTCGGCG
Product: 4-carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase-Like Protein; Carboxymuconolactone Decarboxylase Family Protein
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MLGAALTAGVSPVEAKEIVYQAVPYVGLAKVFDFLHATNDVLTERGVSLPPPGQSTTTTDTRAARGLAV
Sequences:
>Translated_69_residues MLGAALTAGVSPVEAKEIVYQAVPYVGLAKVFDFLHATNDVLTERGVSLPPPGQSTTTTDTRAARGLAV >Mature_69_residues MLGAALTAGVSPVEAKEIVYQAVPYVGLAKVFDFLHATNDVLTERGVSLPPPGQSTTTTDTRAARGLAV
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7141; Mature: 7141
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGAALTAGVSPVEAKEIVYQAVPYVGLAKVFDFLHATNDVLTERGVSLPPPGQSTTTTD CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TRAARGLAV CCCCCCCCC >Mature Secondary Structure MLGAALTAGVSPVEAKEIVYQAVPYVGLAKVFDFLHATNDVLTERGVSLPPPGQSTTTTD CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TRAARGLAV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA