Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315089

Identifier: 158315089

GI number: 158315089

Start: 3893224

End: 3894459

Strand: Direct

Name: 158315089

Synonym: Franean1_3286

Alternate gene names: NA

Gene position: 3893224-3894459 (Clockwise)

Preceding gene: 158315088

Following gene: 158315090

Centisome position: 43.34

GC content: 71.68

Gene sequence:

>1236_bases
ATGGCCACTCCTCGCAAGCCGACCGCGCCGACGGCGGAGGCGATCGACCGGTTCTGCGGCCATTTCGATGACTTGTTCGG
CCGGTTGGCTGAGCGCACCGCGCTGCGGCAGTATCTGATCGGCCTGTTGCTGCCCCGGGAACGGAACAAGACGCTGACGG
AGCTTGCCGCCGTGGTCCCCGGCGCGGACCGGCAGCGGCTGCACCACTTCCTGCACGACGCCCCGTGGGATCCCGACGCC
CTGGGTGCGCGGCGGGTGGACCTGTGGCGTCGGCACCCGGAGCTGGGGCCGCATGGCAACGGGGTGCTCATCATCGACGA
GACCGGGGACCGCAAACGCGGCCATGGCATCGTGCTGGCCGCCCAGCAGTACATCGGCAAGCTCGGCCGCACCGCCAACG
GCGTTGTGGCCGTCACCAGTCACTGGGCGGACGGCAGCCGCCACGTGCCGCTGGGGGTGCGGCCCTACCGGCCCGCCTCC
CGCCTACCCGCCGGCAAGGCGGACCCGGCGTTCGCCACCAAACCGGAGCTGGCCTGGGAGCTGATCGAGGAAGCCCGCGG
CGCCGGTGTGCCTTTCCGGGCGGTGGTCGCCGACTGCGTCTACGGCGAGAACCCCACACTGGAAGGGCGTCTGCGGGCGG
CCAGGATCCGCTACGTGCTGGCCCTGCGTCCCCGCCACGGCACCTGGCAGTTCGTCGCCGATCCCGCTCACCCGCCGGCG
TTCACGCCCGCAGAGGCCGCCGCCCGCCTGCCCCTGGCGGACTGGCGGCGCCTGGTGCTGACCGACAGCCACGGCCGGCC
GCTGGTGCGCCACGTCGCCGAACTGGAGCTGGGCCCCTGCTATGGACCCACCCGCGGCACCCGCCTGATCGCCGCCACCG
CCGACCCGACAGTCCTCACCGCCGACTCGACCTGGTTCATGGCCACCAACCTCTCGACCGCCGAGGCGGACGCGGGGCGA
GGTCTACCGGATCTACCGGCTACGGGACTGGATCGAGCACTACTACAAGCCGGCCAAGCACGAGCTGGGCTGGGCGGACT
TCCAGGTCCGTTCCGAACAGGCTATCGTGCGGCACTGGCAGCTGGTCATGCTGGCGTTCACCTTCAGCCTGCTGAACGCG
CCGCCCTCCGACCACGCACAGGAAACACCCCGCGAGGACCGCGGGGCGGCGGGGGAAAAATCCACGGCGCCGCATCGTCT
GGCAGGACACACTGCGACAGGTCCGCGGCTGGTTGA

Upstream 100 bases:

>100_bases
ATCGGCCAGGAATTTCACTAAGTCGCTGGTTGGTCAGGTTTGGGAAGGCAGACGTACGGTTGGTGGTGTCTGGCTGGGCC
GTTCCGGTGGGAGGTGCCCG

Downstream 100 bases:

>100_bases
GCCCCTGGGCGCGTCTGCAGCTGTACTGGCACCGCTGGTCGACCGCCCCACCCCCACCGGAACTGGCGGCGCTGCTTGAC
CACGTGGGCCACTCCCACCC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MATPRKPTAPTAEAIDRFCGHFDDLFGRLAERTALRQYLIGLLLPRERNKTLTELAAVVPGADRQRLHHFLHDAPWDPDA
LGARRVDLWRRHPELGPHGNGVLIIDETGDRKRGHGIVLAAQQYIGKLGRTANGVVAVTSHWADGSRHVPLGVRPYRPAS
RLPAGKADPAFATKPELAWELIEEARGAGVPFRAVVADCVYGENPTLEGRLRAARIRYVLALRPRHGTWQFVADPAHPPA
FTPAEAAARLPLADWRRLVLTDSHGRPLVRHVAELELGPCYGPTRGTRLIAATADPTVLTADSTWFMATNLSTAEADAGR
GLPDLPATGLDRALLQAGQARAGLGGLPGPFRTGYRAALAAGHAGVHLQPAERAALRPRTGNTPRGPRGGGGKIHGAASS
GRTHCDRSAAG

Sequences:

>Translated_411_residues
MATPRKPTAPTAEAIDRFCGHFDDLFGRLAERTALRQYLIGLLLPRERNKTLTELAAVVPGADRQRLHHFLHDAPWDPDA
LGARRVDLWRRHPELGPHGNGVLIIDETGDRKRGHGIVLAAQQYIGKLGRTANGVVAVTSHWADGSRHVPLGVRPYRPAS
RLPAGKADPAFATKPELAWELIEEARGAGVPFRAVVADCVYGENPTLEGRLRAARIRYVLALRPRHGTWQFVADPAHPPA
FTPAEAAARLPLADWRRLVLTDSHGRPLVRHVAELELGPCYGPTRGTRLIAATADPTVLTADSTWFMATNLSTAEADAGR
GLPDLPATGLDRALLQAGQARAGLGGLPGPFRTGYRAALAAGHAGVHLQPAERAALRPRTGNTPRGPRGGGGKIHGAASS
GRTHCDRSAAG
>Mature_410_residues
ATPRKPTAPTAEAIDRFCGHFDDLFGRLAERTALRQYLIGLLLPRERNKTLTELAAVVPGADRQRLHHFLHDAPWDPDAL
GARRVDLWRRHPELGPHGNGVLIIDETGDRKRGHGIVLAAQQYIGKLGRTANGVVAVTSHWADGSRHVPLGVRPYRPASR
LPAGKADPAFATKPELAWELIEEARGAGVPFRAVVADCVYGENPTLEGRLRAARIRYVLALRPRHGTWQFVADPAHPPAF
TPAEAAARLPLADWRRLVLTDSHGRPLVRHVAELELGPCYGPTRGTRLIAATADPTVLTADSTWFMATNLSTAEADAGRG
LPDLPATGLDRALLQAGQARAGLGGLPGPFRTGYRAALAAGHAGVHLQPAERAALRPRTGNTPRGPRGGGGKIHGAASSG
RTHCDRSAAG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44009; Mature: 43877

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPRKPTAPTAEAIDRFCGHFDDLFGRLAERTALRQYLIGLLLPRERNKTLTELAAVVP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
GADRQRLHHFLHDAPWDPDALGARRVDLWRRHPELGPHGNGVLIIDETGDRKRGHGIVLA
CCHHHHHHHHHHCCCCCCHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEE
AQQYIGKLGRTANGVVAVTSHWADGSRHVPLGVRPYRPASRLPAGKADPAFATKPELAWE
HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHH
LIEEARGAGVPFRAVVADCVYGENPTLEGRLRAARIRYVLALRPRHGTWQFVADPAHPPA
HHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEECCCCCCEEEEECCCCCCC
FTPAEAAARLPLADWRRLVLTDSHGRPLVRHVAELELGPCYGPTRGTRLIAATADPTVLT
CCCHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEE
ADSTWFMATNLSTAEADAGRGLPDLPATGLDRALLQAGQARAGLGGLPGPFRTGYRAALA
CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
AGHAGVHLQPAERAALRPRTGNTPRGPRGGGGKIHGAASSGRTHCDRSAAG
CCCCCEEECHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATPRKPTAPTAEAIDRFCGHFDDLFGRLAERTALRQYLIGLLLPRERNKTLTELAAVVP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
GADRQRLHHFLHDAPWDPDALGARRVDLWRRHPELGPHGNGVLIIDETGDRKRGHGIVLA
CCHHHHHHHHHHCCCCCCHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEE
AQQYIGKLGRTANGVVAVTSHWADGSRHVPLGVRPYRPASRLPAGKADPAFATKPELAWE
HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHH
LIEEARGAGVPFRAVVADCVYGENPTLEGRLRAARIRYVLALRPRHGTWQFVADPAHPPA
HHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEECCCCCCEEEEECCCCCCC
FTPAEAAARLPLADWRRLVLTDSHGRPLVRHVAELELGPCYGPTRGTRLIAATADPTVLT
CCCHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEE
ADSTWFMATNLSTAEADAGRGLPDLPATGLDRALLQAGQARAGLGGLPGPFRTGYRAALA
CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
AGHAGVHLQPAERAALRPRTGNTPRGPRGGGGKIHGAASSGRTHCDRSAAG
CCCCCEEECHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]