Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315027

Identifier: 158315027

GI number: 158315027

Start: 3802106

End: 3803347

Strand: Direct

Name: 158315027

Synonym: Franean1_3221

Alternate gene names: NA

Gene position: 3802106-3803347 (Clockwise)

Preceding gene: 158315025

Following gene: 158315028

Centisome position: 42.33

GC content: 65.14

Gene sequence:

>1242_bases
GTGATCCAGAGACGATTAAGATCATTTGTCGCGATGGCGGGTGCCGTTGCGGTGCTGGTGGCGGCTGCCGGCTGCGGCGG
CTCGTCGTCGGACGGGAGTGGTGGTGATGCGGAGGCGCAGGGTGGCAAGACCTACACGATCGGGGTCTTAGCCGATATCA
CGGGCCCGGCGGCGTCCGGGAACGAGACCAGCGTCGAGGGCGTCAAGGCGGGGACGTACTACGCCGAGCGCGAGGGAATC
AAGATCAAGTACATCGTGGCCGACACGGCGACGAATCCGACGACCGCGCTCTCGGCCGCGCAGAAGCTGGTCACGCAGGA
TCACGTGTTCGCCGTGATCGCCCACTCGGCGATCACGTTCTCCGCGGCTTCCTACCTCACCGCTCAGAAGGTCCCGGTCA
TCGGTTTCGCCCAGGACGGCCGAGAGTGGTTCACGTCCCCGAACATGTTCTCGATCACCGGGCCGACGATCGACAAAGAA
GTCACGACGACGATGGGCGAGTTCTTCAAGTCGAAGGGGGCGACCAGCATCGCCTCGATCGGTTACTCGGTCTCGCCCCA
GTCGCAGGCCTCGGCGCTCGAGACGGCGGAGTCGGCCAGACTCGCGGGTGTCAAAATAGGCTACGTCAACGCGCAGCTCC
CGTTCGGTAGCACCGATGTCGGTCCGACAGTGCTGGCCATGAAGGAAGCCAAGATCGATTCCTTCTTCGCCGCGGTCGAC
CCGAACACCGCCTTCGCTCTCATCTCCGGCCTGGAACAGCAGGGCGTGGACATCAAGGTGGCGCTGCTGCCCACCGGCTA
TGGCGGTGACCTGGCGCAGGCTGGCCCGGGCGCGCGGCGAGCGGCTCAGGGTGTCTACTTCTCCCTCGGATACCAGCCCG
TCGAGATGCAGACAGCCGCTACCAAGCAGTTCCAGAGCGACCTGAAAGAAGCGGGGATCACCGGGGCGCCGACGCTCGCG
CATTACAACGGGTACATCTCGGTCGGTCTGCTCGTCCGGGCTCTCAAGGCGGCTGGCGCGGATCCGACGCCGGCATCGCT
CACCAAGGCGCTCGCCGGAATCCATGACTGGGACGGCCTCGGCCTCTACGGGGCCACGAAGTACGACCTCAGCCAGAAGA
AGATCTCGACCGGCGAGTGCCTGTTCATGAGCAGACTGGACGGCAGCACGTTCAAGCCCGTCCCCGACGCTATCCCCATC
TGCGGCGACCTGACCGACGAGAAGGTCACGCTCTCGTCCTGA

Upstream 100 bases:

>100_bases
CTGCATCGGTGGTCCCGGCCTGCGCCCCGGGGCTGCCTGGGCCGTTCCCGCGAACTGCTGACGGATCCAGCGAGCGCCAT
CGAATGGACTAGGGGACACT

Downstream 100 bases:

>100_bases
CGGGCGGCCAGGCCGGCCCGCCCACGCCGTGGGCGGGCCGGCCGACGTGGCGTGGAGATCACCTACCGGCCTGCTCTGCC
GCGCCGGGGGTCGGCCATGG

Product: branched-chain amino acid ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MIQRRLRSFVAMAGAVAVLVAAAGCGGSSSDGSGGDAEAQGGKTYTIGVLADITGPAASGNETSVEGVKAGTYYAEREGI
KIKYIVADTATNPTTALSAAQKLVTQDHVFAVIAHSAITFSAASYLTAQKVPVIGFAQDGREWFTSPNMFSITGPTIDKE
VTTTMGEFFKSKGATSIASIGYSVSPQSQASALETAESARLAGVKIGYVNAQLPFGSTDVGPTVLAMKEAKIDSFFAAVD
PNTAFALISGLEQQGVDIKVALLPTGYGGDLAQAGPGARRAAQGVYFSLGYQPVEMQTAATKQFQSDLKEAGITGAPTLA
HYNGYISVGLLVRALKAAGADPTPASLTKALAGIHDWDGLGLYGATKYDLSQKKISTGECLFMSRLDGSTFKPVPDAIPI
CGDLTDEKVTLSS

Sequences:

>Translated_413_residues
MIQRRLRSFVAMAGAVAVLVAAAGCGGSSSDGSGGDAEAQGGKTYTIGVLADITGPAASGNETSVEGVKAGTYYAEREGI
KIKYIVADTATNPTTALSAAQKLVTQDHVFAVIAHSAITFSAASYLTAQKVPVIGFAQDGREWFTSPNMFSITGPTIDKE
VTTTMGEFFKSKGATSIASIGYSVSPQSQASALETAESARLAGVKIGYVNAQLPFGSTDVGPTVLAMKEAKIDSFFAAVD
PNTAFALISGLEQQGVDIKVALLPTGYGGDLAQAGPGARRAAQGVYFSLGYQPVEMQTAATKQFQSDLKEAGITGAPTLA
HYNGYISVGLLVRALKAAGADPTPASLTKALAGIHDWDGLGLYGATKYDLSQKKISTGECLFMSRLDGSTFKPVPDAIPI
CGDLTDEKVTLSS
>Mature_413_residues
MIQRRLRSFVAMAGAVAVLVAAAGCGGSSSDGSGGDAEAQGGKTYTIGVLADITGPAASGNETSVEGVKAGTYYAEREGI
KIKYIVADTATNPTTALSAAQKLVTQDHVFAVIAHSAITFSAASYLTAQKVPVIGFAQDGREWFTSPNMFSITGPTIDKE
VTTTMGEFFKSKGATSIASIGYSVSPQSQASALETAESARLAGVKIGYVNAQLPFGSTDVGPTVLAMKEAKIDSFFAAVD
PNTAFALISGLEQQGVDIKVALLPTGYGGDLAQAGPGARRAAQGVYFSLGYQPVEMQTAATKQFQSDLKEAGITGAPTLA
HYNGYISVGLLVRALKAAGADPTPASLTKALAGIHDWDGLGLYGATKYDLSQKKISTGECLFMSRLDGSTFKPVPDAIPI
CGDLTDEKVTLSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42571; Mature: 42571

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRRLRSFVAMAGAVAVLVAAAGCGGSSSDGSGGDAEAQGGKTYTIGVLADITGPAASG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
NETSVEGVKAGTYYAEREGIKIKYIVADTATNPTTALSAAQKLVTQDHVFAVIAHSAITF
CCCCCCCEECCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHH
SAASYLTAQKVPVIGFAQDGREWFTSPNMFSITGPTIDKEVTTTMGEFFKSKGATSIASI
HHHHHHHHCCCCEEEEECCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHC
GYSVSPQSQASALETAESARLAGVKIGYVNAQLPFGSTDVGPTVLAMKEAKIDSFFAAVD
CCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEEEEEHHCHHHEEEEEC
PNTAFALISGLEQQGVDIKVALLPTGYGGDLAQAGPGARRAAQGVYFSLGYQPVEMQTAA
CCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCCCHHHHHCCEEEEECCCCEEHHHHH
TKQFQSDLKEAGITGAPTLAHYNGYISVGLLVRALKAAGADPTPASLTKALAGIHDWDGL
HHHHHHHHHHCCCCCCCHHHHCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC
GLYGATKYDLSQKKISTGECLFMSRLDGSTFKPVPDAIPICGDLTDEKVTLSS
CCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MIQRRLRSFVAMAGAVAVLVAAAGCGGSSSDGSGGDAEAQGGKTYTIGVLADITGPAASG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
NETSVEGVKAGTYYAEREGIKIKYIVADTATNPTTALSAAQKLVTQDHVFAVIAHSAITF
CCCCCCCEECCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHH
SAASYLTAQKVPVIGFAQDGREWFTSPNMFSITGPTIDKEVTTTMGEFFKSKGATSIASI
HHHHHHHHCCCCEEEEECCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHC
GYSVSPQSQASALETAESARLAGVKIGYVNAQLPFGSTDVGPTVLAMKEAKIDSFFAAVD
CCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEEEEEHHCHHHEEEEEC
PNTAFALISGLEQQGVDIKVALLPTGYGGDLAQAGPGARRAAQGVYFSLGYQPVEMQTAA
CCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHCCCCHHHHHCCEEEEECCCCEEHHHHH
TKQFQSDLKEAGITGAPTLAHYNGYISVGLLVRALKAAGADPTPASLTKALAGIHDWDGL
HHHHHHHHHHCCCCCCCHHHHCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC
GLYGATKYDLSQKKISTGECLFMSRLDGSTFKPVPDAIPICGDLTDEKVTLSS
CCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA