Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315025

Identifier: 158315025

GI number: 158315025

Start: 3799209

End: 3800441

Strand: Direct

Name: 158315025

Synonym: Franean1_3219

Alternate gene names: NA

Gene position: 3799209-3800441 (Clockwise)

Preceding gene: 158315024

Following gene: 158315027

Centisome position: 42.3

GC content: 67.56

Gene sequence:

>1233_bases
ATGTTCCAAAAACGTAAGCGCCTGGTCTCCGTGGCGGCGGGTGCCGCGGCGGTGCTGGTGGCGGTCGCCGCCTGCGGCGG
TTCGTCGTCGGACGGCGGCAGTGACGGCAGGACCTACACGGTCGGTGTGTTGACCGACGTCACCGGCCCGGCCGCTTCCG
GGAACGAGAGCAGCGTCGACGGCGTCAAGGCGGGGGTCTACTACGCCGCGCGCGAGGGCTACACGATCAAGTATGTGGTG
GCCGACACGGCGACGAATCCGACCACCGCGCTTTCGGCGGCGCAGAAGCTGGTCACGCAGGATCATGTGTTTGCCGTCAT
CGCGGCCTCGGCCATCGCGTACTCGGCTGCTCCTTTCCTCACCGCCCAGAAGATCCCCGTGATCGGCATGCCCCAGGACG
GCCCGGAGTGGAACACGGCGCCGAACATGTTCCCGATCACCGGTCCCTACCCGACCGGTGATGTCACCACGACGATGGGC
GAGATCTTCAAGAAGCTGGGCGCGACCAACGTCGCCTCGCTCGCGTACGCCGTCTCACCGGGCTCCCAGGTCGCCGCGGG
CCTCGCGGCCGAGTCCGCGAAGGAGGTTGGCCTCAAGATCGGCTACCTCAACACGCAGTTCCCGTTCGGTGGCACCGACG
TCGGGCCCGCGGTGCTGGCCATGAAGGAAGCCGGCATTGACGGCTTCACCGCGACGGTCGACCCGAACACGGCCTTCGCG
CTGATCAAGGGCCTGCGCCAGCAGGGGGTCGACATCAAGGCGGCTCTACTGCCGACGGGCTACGGTGGGGACCTGCTCCA
GGCCGGCCCTGGTGCGCTGGACGAGGCGGACGGCGTGTACTTCACGTTGCCCTACCAGCCCGTCGAGATGAAGACCGCCG
CCACGAAGCAGTTCCAGGCAGACCTCAAGGAAGCCGGCATCACCGACGAACCGACATTCGCCCAGTACAACGGCTACACC
TCTGTCGGCCTGCTGATCCGTGGCCTCAAGGCGGCGGGCGCCGACCCGAGCAGGGCGTCTCTCACCACGGCGCTGGAGAG
CATCCACGACTGGGATGCGCTGGGCCTGTTCGACACCGGGCTTGACATCAACGCCCCCAAGATCGGTACAAACGGCAAGG
GTGAGTGCCTGTACGTCGCGCAGCTCAAGGGCAGCGAGTTCGTCCCTGTCGAGGGAGTGCTTCCGGCGTGCGGGCGCATG
GTCCCCGGAAGGCAGGTCAAGCCCGCGGCCTGA

Upstream 100 bases:

>100_bases
AGATGCAGGCCCGCACCGGACGCCGACTCCGGCCGGTGCCTGCATTCCGATGAACCGCACACAAGCCGGTGCGAGAGCAC
GGACAGTATGAGGGGAAAGC

Downstream 100 bases:

>100_bases
CCTGGCGACCGGGATGCCGACGGGCCCTGGCTCGCGCTTGCGGGCAGGGGGCCCGTCGGCTGTGGCCACTGCGGGACGGC
GGGGGCCAGTTCAGGAATCG

Product: branched-chain amino acid ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MFQKRKRLVSVAAGAAAVLVAVAACGGSSSDGGSDGRTYTVGVLTDVTGPAASGNESSVDGVKAGVYYAAREGYTIKYVV
ADTATNPTTALSAAQKLVTQDHVFAVIAASAIAYSAAPFLTAQKIPVIGMPQDGPEWNTAPNMFPITGPYPTGDVTTTMG
EIFKKLGATNVASLAYAVSPGSQVAAGLAAESAKEVGLKIGYLNTQFPFGGTDVGPAVLAMKEAGIDGFTATVDPNTAFA
LIKGLRQQGVDIKAALLPTGYGGDLLQAGPGALDEADGVYFTLPYQPVEMKTAATKQFQADLKEAGITDEPTFAQYNGYT
SVGLLIRGLKAAGADPSRASLTTALESIHDWDALGLFDTGLDINAPKIGTNGKGECLYVAQLKGSEFVPVEGVLPACGRM
VPGRQVKPAA

Sequences:

>Translated_410_residues
MFQKRKRLVSVAAGAAAVLVAVAACGGSSSDGGSDGRTYTVGVLTDVTGPAASGNESSVDGVKAGVYYAAREGYTIKYVV
ADTATNPTTALSAAQKLVTQDHVFAVIAASAIAYSAAPFLTAQKIPVIGMPQDGPEWNTAPNMFPITGPYPTGDVTTTMG
EIFKKLGATNVASLAYAVSPGSQVAAGLAAESAKEVGLKIGYLNTQFPFGGTDVGPAVLAMKEAGIDGFTATVDPNTAFA
LIKGLRQQGVDIKAALLPTGYGGDLLQAGPGALDEADGVYFTLPYQPVEMKTAATKQFQADLKEAGITDEPTFAQYNGYT
SVGLLIRGLKAAGADPSRASLTTALESIHDWDALGLFDTGLDINAPKIGTNGKGECLYVAQLKGSEFVPVEGVLPACGRM
VPGRQVKPAA
>Mature_410_residues
MFQKRKRLVSVAAGAAAVLVAVAACGGSSSDGGSDGRTYTVGVLTDVTGPAASGNESSVDGVKAGVYYAAREGYTIKYVV
ADTATNPTTALSAAQKLVTQDHVFAVIAASAIAYSAAPFLTAQKIPVIGMPQDGPEWNTAPNMFPITGPYPTGDVTTTMG
EIFKKLGATNVASLAYAVSPGSQVAAGLAAESAKEVGLKIGYLNTQFPFGGTDVGPAVLAMKEAGIDGFTATVDPNTAFA
LIKGLRQQGVDIKAALLPTGYGGDLLQAGPGALDEADGVYFTLPYQPVEMKTAATKQFQADLKEAGITDEPTFAQYNGYT
SVGLLIRGLKAAGADPSRASLTTALESIHDWDALGLFDTGLDINAPKIGTNGKGECLYVAQLKGSEFVPVEGVLPACGRM
VPGRQVKPAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41940; Mature: 41940

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQKRKRLVSVAAGAAAVLVAVAACGGSSSDGGSDGRTYTVGVLTDVTGPAASGNESSVD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCC
GVKAGVYYAAREGYTIKYVVADTATNPTTALSAAQKLVTQDHVFAVIAASAIAYSAAPFL
HHHHCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
TAQKIPVIGMPQDGPEWNTAPNMFPITGPYPTGDVTTTMGEIFKKLGATNVASLAYAVSP
EECCCCEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHEEEEECC
GSQVAAGLAAESAKEVGLKIGYLNTQFPFGGTDVGPAVLAMKEAGIDGFTATVDPNTAFA
CHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHH
LIKGLRQQGVDIKAALLPTGYGGDLLQAGPGALDEADGVYFTLPYQPVEMKTAATKQFQA
HHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
DLKEAGITDEPTFAQYNGYTSVGLLIRGLKAAGADPSRASLTTALESIHDWDALGLFDTG
HHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECC
LDINAPKIGTNGKGECLYVAQLKGSEFVPVEGVLPACGRMVPGRQVKPAA
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFQKRKRLVSVAAGAAAVLVAVAACGGSSSDGGSDGRTYTVGVLTDVTGPAASGNESSVD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCC
GVKAGVYYAAREGYTIKYVVADTATNPTTALSAAQKLVTQDHVFAVIAASAIAYSAAPFL
HHHHCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
TAQKIPVIGMPQDGPEWNTAPNMFPITGPYPTGDVTTTMGEIFKKLGATNVASLAYAVSP
EECCCCEEECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHEEEEECC
GSQVAAGLAAESAKEVGLKIGYLNTQFPFGGTDVGPAVLAMKEAGIDGFTATVDPNTAFA
CHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHH
LIKGLRQQGVDIKAALLPTGYGGDLLQAGPGALDEADGVYFTLPYQPVEMKTAATKQFQA
HHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
DLKEAGITDEPTFAQYNGYTSVGLLIRGLKAAGADPSRASLTTALESIHDWDALGLFDTG
HHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECC
LDINAPKIGTNGKGECLYVAQLKGSEFVPVEGVLPACGRMVPGRQVKPAA
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA