Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314943

Identifier: 158314943

GI number: 158314943

Start: 3688413

End: 3689612

Strand: Direct

Name: 158314943

Synonym: Franean1_3134

Alternate gene names: NA

Gene position: 3688413-3689612 (Clockwise)

Preceding gene: 158314942

Following gene: 158314944

Centisome position: 41.06

GC content: 67.08

Gene sequence:

>1200_bases
ATGACGACCAAGACTCACAACACGGACAAGTCGGTGCGCTACGACCTCGTCCTACGCGGCGGACGGGTGTTCGACACCAC
AATCGCGCCGGCCCCGACCGTCTTGGACATCGCCATCACCGACGGACGGGTGGCCACCGTGGCGCCGCACGTCGACGGTG
TGGGAACGCGGGAGATCGACTGTACCGATCGCGTTGTGACGCCGGGGCTGCTGGACGTGCACGTCCACTGCTTCGAGGGA
ATGGCCATGACCATTGGCATGTCGTCCTACGACGCGACCCTGCGTCGTGGCGTGGTCGGTTGTGTCGACACGGGAACGTC
AGGAGCCTCCAACTTCCGTGGCTTCCGCCGCTTCGCGGTGGGCGACAACGAGTTCCGCGTACTGGCGTTCCTCAACGTCT
CGGTGCTCGGAGTGACGGACAAGCGGCACGGCGAGTTACAGGACATCTCGGTCATCCATGTGGACGACGCGGTGAACGCC
GCCAAGGCGAACCCTTCGATCATCCGCGGCTTCAAGGTGCGGCTGTCCCGGAACATCGCGTTGGAGCCGGCGAAGTCTCT
GGACCTGGCCCGCGAGATCGCCGGCCTGGCGGGCCTGCCACTGATGGTCCACATCAGCAAGACGGACATCAGCACCGACG
ACATCCTGGCGCGGCTTGCCCCCGGAGACGTCGTCACCCACGCCTTCACCGGGCTCGAGGGAGGCATTGTCGAGAACGGC
TCGGTGCGACCCGCGGCCTGGGAGGCCCGTGAACGGGGCGTGCTGTTCGACATCGGTCACGGCCGCACCCAGTTCGACCA
CGGGGTGGCCCGTATCGCGCTCGACGAAGGCTTCGTCCCCGATTTCCTGGGTTCGGACCTCAGCAACGGCAACCAGTTCG
GTCCGGCCTTCGATCTCCCGACCGTCATGGCCAAGATGGTCACCCTGGGGATGCCGATTCAGGACGTGGTCGCGGCAACG
ACGCTCCGCGCCGCTGAGTTCCTCGGGCTGCGGGACGAGGGCTACGGCGCGATCACGGTGGGCAGGCCGGCGTTCGTGAC
CGTCATGGAGCATCTCGACCACGTGGACTCGCTGCCGGACGCCTCTGGGGCGGAGCTCGAGGTCAGGCGACTGGAGCCGC
TGTTCGCCGTCAACAAGGGTGTCGTCCACGACTCCGATCCGTGGCGGGGCGGGCAGCCCGAGCCGCCGGCGGAGTGGTGA

Upstream 100 bases:

>100_bases
AGTCCACCACCCGCGAGTCGACCCGACCGAGTTCGAGTCACCGGCTGGCAGCCGGTGAAGCCCGTTCCGACGAACACCTG
AGAAAGGACGTGTGCTAGCG

Downstream 100 bases:

>100_bases
TGCTTCAACTCGATGGCAGGGCTCGTGGAAGTTGGGGATTCGCGGCCCGACAGGGGAGGAGAGTTTCGTGAGCTCGTGGG
TGAAACTGGTTGTAGACGAG

Product: amidohydrolase

Products: NA

Alternate protein names: Amidohydrolase; Amidohydrolase Family Protein; Metallo-Dependent Hydrolase; Aminohydrolase; Protein PhnM; LOW QUALITY PROTEIN Amidohydrolase

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTTKTHNTDKSVRYDLVLRGGRVFDTTIAPAPTVLDIAITDGRVATVAPHVDGVGTREIDCTDRVVTPGLLDVHVHCFEG
MAMTIGMSSYDATLRRGVVGCVDTGTSGASNFRGFRRFAVGDNEFRVLAFLNVSVLGVTDKRHGELQDISVIHVDDAVNA
AKANPSIIRGFKVRLSRNIALEPAKSLDLAREIAGLAGLPLMVHISKTDISTDDILARLAPGDVVTHAFTGLEGGIVENG
SVRPAAWEARERGVLFDIGHGRTQFDHGVARIALDEGFVPDFLGSDLSNGNQFGPAFDLPTVMAKMVTLGMPIQDVVAAT
TLRAAEFLGLRDEGYGAITVGRPAFVTVMEHLDHVDSLPDASGAELEVRRLEPLFAVNKGVVHDSDPWRGGQPEPPAEW

Sequences:

>Translated_399_residues
MTTKTHNTDKSVRYDLVLRGGRVFDTTIAPAPTVLDIAITDGRVATVAPHVDGVGTREIDCTDRVVTPGLLDVHVHCFEG
MAMTIGMSSYDATLRRGVVGCVDTGTSGASNFRGFRRFAVGDNEFRVLAFLNVSVLGVTDKRHGELQDISVIHVDDAVNA
AKANPSIIRGFKVRLSRNIALEPAKSLDLAREIAGLAGLPLMVHISKTDISTDDILARLAPGDVVTHAFTGLEGGIVENG
SVRPAAWEARERGVLFDIGHGRTQFDHGVARIALDEGFVPDFLGSDLSNGNQFGPAFDLPTVMAKMVTLGMPIQDVVAAT
TLRAAEFLGLRDEGYGAITVGRPAFVTVMEHLDHVDSLPDASGAELEVRRLEPLFAVNKGVVHDSDPWRGGQPEPPAEW
>Mature_398_residues
TTKTHNTDKSVRYDLVLRGGRVFDTTIAPAPTVLDIAITDGRVATVAPHVDGVGTREIDCTDRVVTPGLLDVHVHCFEGM
AMTIGMSSYDATLRRGVVGCVDTGTSGASNFRGFRRFAVGDNEFRVLAFLNVSVLGVTDKRHGELQDISVIHVDDAVNAA
KANPSIIRGFKVRLSRNIALEPAKSLDLAREIAGLAGLPLMVHISKTDISTDDILARLAPGDVVTHAFTGLEGGIVENGS
VRPAAWEARERGVLFDIGHGRTQFDHGVARIALDEGFVPDFLGSDLSNGNQFGPAFDLPTVMAKMVTLGMPIQDVVAATT
LRAAEFLGLRDEGYGAITVGRPAFVTVMEHLDHVDSLPDASGAELEVRRLEPLFAVNKGVVHDSDPWRGGQPEPPAEW

Specific function: Unknown

COG id: COG3964

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42745; Mature: 42614

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKTHNTDKSVRYDLVLRGGRVFDTTIAPAPTVLDIAITDGRVATVAPHVDGVGTREID
CCCCCCCCCCCEEEEEEEECCEEEEEECCCCCEEEEEEEECCEEEEEECCCCCCCCCCCC
CTDRVVTPGLLDVHVHCFEGMAMTIGMSSYDATLRRGVVGCVDTGTSGASNFRGFRRFAV
CCCCCCCCCEEEEEEEECCCEEEEEECCHHHHHHHCCCEEEEECCCCCCHHHHHHEEEEC
GDNEFRVLAFLNVSVLGVTDKRHGELQDISVIHVDDAVNAAKANPSIIRGFKVRLSRNIA
CCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHEEEEEEEEECCEE
LEPAKSLDLAREIAGLAGLPLMVHISKTDISTDDILARLAPGDVVTHAFTGLEGGIVENG
ECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHCCCCCCEECCC
SVRPAAWEARERGVLFDIGHGRTQFDHGVARIALDEGFVPDFLGSDLSNGNQFGPAFDLP
CCCCCHHHHHHCCEEEECCCCCCHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHH
TVMAKMVTLGMPIQDVVAATTLRAAEFLGLRDEGYGAITVGRPAFVTVMEHLDHVDSLPD
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
ASGAELEVRRLEPLFAVNKGVVHDSDPWRGGQPEPPAEW
CCCCEEEEECCCCHHHHCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTKTHNTDKSVRYDLVLRGGRVFDTTIAPAPTVLDIAITDGRVATVAPHVDGVGTREID
CCCCCCCCCCEEEEEEEECCEEEEEECCCCCEEEEEEEECCEEEEEECCCCCCCCCCCC
CTDRVVTPGLLDVHVHCFEGMAMTIGMSSYDATLRRGVVGCVDTGTSGASNFRGFRRFAV
CCCCCCCCCEEEEEEEECCCEEEEEECCHHHHHHHCCCEEEEECCCCCCHHHHHHEEEEC
GDNEFRVLAFLNVSVLGVTDKRHGELQDISVIHVDDAVNAAKANPSIIRGFKVRLSRNIA
CCCCEEEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHEEEEEEEEECCEE
LEPAKSLDLAREIAGLAGLPLMVHISKTDISTDDILARLAPGDVVTHAFTGLEGGIVENG
ECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHCCCCCCEECCC
SVRPAAWEARERGVLFDIGHGRTQFDHGVARIALDEGFVPDFLGSDLSNGNQFGPAFDLP
CCCCCHHHHHHCCEEEECCCCCCHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHH
TVMAKMVTLGMPIQDVVAATTLRAAEFLGLRDEGYGAITVGRPAFVTVMEHLDHVDSLPD
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
ASGAELEVRRLEPLFAVNKGVVHDSDPWRGGQPEPPAEW
CCCCEEEEECCCCHHHHCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA