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The map label for this gene is ytlD [H]

Identifier: 158314940

GI number: 158314940

Start: 3685915

End: 3686760

Strand: Direct

Name: ytlD [H]

Synonym: Franean1_3131

Alternate gene names: 158314940

Gene position: 3685915-3686760 (Clockwise)

Preceding gene: 158314939

Following gene: 158314941

Centisome position: 41.04

GC content: 61.94

Gene sequence:

>846_bases
ATGGCCCAGGATGTGGCAACAGTGGTCGGTTCCGTGGAACGCAAGCAGGTTCCTCCACGCCGCCGGTTCAGCCAGCGACC
GATCGACTTTTTGACGATGTTCGCTACGGTGGTGGTGGCCATCGCCCTGTGGCACTTCGCCATCGCGTATTTCGAGGTCG
AACCGTACCTGTTTCCGGCGCCTCTTCCAGTCCTGAGGTCTCTCATCGAGGGCTTAGGTGACGGCTCCCTTCTCTCCAAC
GGATGGGTGACTATGAAGGAGGTGTTGGTCGGTTTCAGCCTCGGATCGCTGCTGGCGATCAGCTTGGCGGTGATCATCAC
GCGGTGGCGGTTCGTCGAGCGCACCTTCTACCCGTTCATCGTGGCGTTCCAGACCATCCCGAAGATCGCACTTGCACCGA
TCATCATCACGTGGATGGGCTTCGGCGAGGCCTCGAAGATGCTCATGGCAGGCCTCCTGACTCTGTTCCCCGTGCTCGTC
AACACGATCACCGGGCTGAAGTCCGTCGAGCAGGACCAGCTCGACCTCATGCGAGCTCTCCAGGCCACTGAATGGCAGAT
CTTCCGTTACGTGCGGTTGCCGCGAGCCCTGCCCTACATATTCGCCGGGCTCGAGATCTCCATTGTCTTCAGCGTGATCG
GCGCCATCGTCGGGGAGTTCGTGGGCGCCGAGGCTGGACTCGGCTATCTGATCCAGGCCAGTCAGGCCACTTTGGACGCG
ACCACCACCGTCGCCGTGCTCGTCGTCCTCTCGGTCATGGGACTCGTCCTGCACCGCATCGTGACCTTCGTGAAGAGCCG
CGTCGTGTTCTGGCTCCGCGACGACGACGCCGTCGTGGGCGTCTGA

Upstream 100 bases:

>100_bases
CGTGCACGTGCGTTGCTCAACGCTGAGACCACTGCTCACTGAGCCTCTGATATCGGCTGCGAACCAGCTCATCACGTCGA
ACAAATCGGAAGGTCAGACG

Downstream 100 bases:

>100_bases
GGGCGTACTCGTCGTGGCACTCGTCCGTCCGGCGGTTCAGTTCCTGCACGCATCCGACTCCGAAGGACTCAACGTTGACG
ATCCATGTGGGAGTGATGGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MAQDVATVVGSVERKQVPPRRRFSQRPIDFLTMFATVVVAIALWHFAIAYFEVEPYLFPAPLPVLRSLIEGLGDGSLLSN
GWVTMKEVLVGFSLGSLLAISLAVIITRWRFVERTFYPFIVAFQTIPKIALAPIIITWMGFGEASKMLMAGLLTLFPVLV
NTITGLKSVEQDQLDLMRALQATEWQIFRYVRLPRALPYIFAGLEISIVFSVIGAIVGEFVGAEAGLGYLIQASQATLDA
TTTVAVLVVLSVMGLVLHRIVTFVKSRVVFWLRDDDAVVGV

Sequences:

>Translated_281_residues
MAQDVATVVGSVERKQVPPRRRFSQRPIDFLTMFATVVVAIALWHFAIAYFEVEPYLFPAPLPVLRSLIEGLGDGSLLSN
GWVTMKEVLVGFSLGSLLAISLAVIITRWRFVERTFYPFIVAFQTIPKIALAPIIITWMGFGEASKMLMAGLLTLFPVLV
NTITGLKSVEQDQLDLMRALQATEWQIFRYVRLPRALPYIFAGLEISIVFSVIGAIVGEFVGAEAGLGYLIQASQATLDA
TTTVAVLVVLSVMGLVLHRIVTFVKSRVVFWLRDDDAVVGV
>Mature_280_residues
AQDVATVVGSVERKQVPPRRRFSQRPIDFLTMFATVVVAIALWHFAIAYFEVEPYLFPAPLPVLRSLIEGLGDGSLLSNG
WVTMKEVLVGFSLGSLLAISLAVIITRWRFVERTFYPFIVAFQTIPKIALAPIIITWMGFGEASKMLMAGLLTLFPVLVN
TITGLKSVEQDQLDLMRALQATEWQIFRYVRLPRALPYIFAGLEISIVFSVIGAIVGEFVGAEAGLGYLIQASQATLDAT
TTVAVLVVLSVMGLVLHRIVTFVKSRVVFWLRDDDAVVGV

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=214, Percent_Identity=27.1028037383178, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1786564, Length=205, Percent_Identity=26.3414634146341, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31006; Mature: 30875

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC
>Mature Secondary Structure 
AQDVATVVGSVERKQVPPRRRFSQRPIDFLTMFATVVVAIALWHFAIAYFEVEPYLFPA
CCHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
PLPVLRSLIEGLGDGSLLSNGWVTMKEVLVGFSLGSLLAISLAVIITRWRFVERTFYPFI
CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAFQTIPKIALAPIIITWMGFGEASKMLMAGLLTLFPVLVNTITGLKSVEQDQLDLMRAL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QATEWQIFRYVRLPRALPYIFAGLEISIVFSVIGAIVGEFVGAEAGLGYLIQASQATLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCHHHHH
TTTVAVLVVLSVMGLVLHRIVTFVKSRVVFWLRDDDAVVGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]