Click here to switch to the map view.

The map label for this gene is 158314911

Identifier: 158314911

GI number: 158314911

Start: 3659724

End: 3660155

Strand: Direct

Name: 158314911

Synonym: Franean1_3101

Alternate gene names: NA

Gene position: 3659724-3660155 (Clockwise)

Preceding gene: 158314909

Following gene: 158314913

Centisome position: 40.74

GC content: 73.84

Gene sequence:

>432_bases
GTGGCCGAGTTCTGGCACCCCACACGCCCGGCCCCACCCCCACAACAACCCCCAGCAAGGAGCGCGCCCCCCTTCCCCGG
CCCGGACCCGACGGCCTCCCTCGACCAGCCCGCCCTCCGCACGCACGCCCGATCCGGTCGCCTCCTCCATGGGCCGCAGC
GCCGCGTTTCTCTCGCGGTGGTGCTGCTCATCATCACCGGCATGGTCCTCCTCGCCAGTTCCGCGCGGGACAGGAATCCG
AGCGCGACCAGCGCCCACTCCGCTGCGCACACCCCCGCCGCGCCGCCGACATCGACTCCCACACCCAGCCTGTCGGGTTC
CCCCTTGCGCGGCCACACCGACTCGGTGCGGTCGGTAGCGTTCTCCCCGGACGGGCGCACGCTGGCCAGCCCCAGCCAGG
ACCGCACGGTGCGGCTGTGGGACATGGGCTGA

Upstream 100 bases:

>100_bases
CCTCCTTCGTCGGTAGACGTGAGCAACCCCGAGGGACCTACCCCCGACCCCGGGGAGTCACCAGGAGCGGAGGCCCCGCC
CCTTCATCGCATCAACACCG

Downstream 100 bases:

>100_bases
CCGGATCCTGATCCCAGAAGAGGCATACGAGGCCAATCTTCAGCACTCCGAAGCCCCTCAGAACACCACTGACAGCTGAA
CCGCAGGACATCCACGGGAA

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAEFWHPTRPAPPPQQPPARSAPPFPGPDPTASLDQPALRTHARSGRLLHGPQRRVSLAVVLLIITGMVLLASSARDRNP
SATSAHSAAHTPAAPPTSTPTPSLSGSPLRGHTDSVRSVAFSPDGRTLASPSQDRTVRLWDMG

Sequences:

>Translated_143_residues
MAEFWHPTRPAPPPQQPPARSAPPFPGPDPTASLDQPALRTHARSGRLLHGPQRRVSLAVVLLIITGMVLLASSARDRNP
SATSAHSAAHTPAAPPTSTPTPSLSGSPLRGHTDSVRSVAFSPDGRTLASPSQDRTVRLWDMG
>Mature_142_residues
AEFWHPTRPAPPPQQPPARSAPPFPGPDPTASLDQPALRTHARSGRLLHGPQRRVSLAVVLLIITGMVLLASSARDRNPS
ATSAHSAAHTPAAPPTSTPTPSLSGSPLRGHTDSVRSVAFSPDGRTLASPSQDRTVRLWDMG

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15066; Mature: 14935

Theoretical pI: Translated: 12.24; Mature: 12.24

Prosite motif: PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFWHPTRPAPPPQQPPARSAPPFPGPDPTASLDQPALRTHARSGRLLHGPQRRVSLAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHH
VLLIITGMVLLASSARDRNPSATSAHSAAHTPAAPPTSTPTPSLSGSPLRGHTDSVRSVA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEE
FSPDGRTLASPSQDRTVRLWDMG
ECCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
AEFWHPTRPAPPPQQPPARSAPPFPGPDPTASLDQPALRTHARSGRLLHGPQRRVSLAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHH
VLLIITGMVLLASSARDRNPSATSAHSAAHTPAAPPTSTPTPSLSGSPLRGHTDSVRSVA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEE
FSPDGRTLASPSQDRTVRLWDMG
ECCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA