| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314909
Identifier: 158314909
GI number: 158314909
Start: 3657972
End: 3658169
Strand: Direct
Name: 158314909
Synonym: Franean1_3099
Alternate gene names: NA
Gene position: 3657972-3658169 (Clockwise)
Preceding gene: 158314904
Following gene: 158314911
Centisome position: 40.73
GC content: 66.67
Gene sequence:
>198_bases ATGCTGATCTTCGGTGAGCGGCATCTGCGCACCGTCCTGGCCGACTACGCACGGCACTACAACGGACGACGACCCCACCG CGGCCGCGACCTTCAACCACCCCGGCCCGACCACCCTGTCGCCGACCTGGCCAGGGAGCGGATCAAGCGCCGGCCTGTCC TCGCTGGCCTGATCAACGAATACGAACGAGCAGCCTAA
Upstream 100 bases:
>100_bases CGCCGGCATCATCGCCGTCAAGATCCCACCTCGAACGCCGCGGGCGAACGCCTACGCTGAGCGGTTCGTCCGCACGGTCC GGACCGAGGTCACCGACCGG
Downstream 100 bases:
>100_bases AAGCCCAGGTCATCCCTGAAGGGGTGGGGCCGGTCAAGCGGTTCCGGTGTGGGGGTTGGGCCTGTTTTCCGGCCTGGTTC TGGGTGCCTGTGGGCGTGCG
Product: putative transposase
Products: NA
Alternate protein names: Integrase; Transposase
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MLIFGERHLRTVLADYARHYNGRRPHRGRDLQPPRPDHPVADLARERIKRRPVLAGLINEYERAA
Sequences:
>Translated_65_residues MLIFGERHLRTVLADYARHYNGRRPHRGRDLQPPRPDHPVADLARERIKRRPVLAGLINEYERAA >Mature_65_residues MLIFGERHLRTVLADYARHYNGRRPHRGRDLQPPRPDHPVADLARERIKRRPVLAGLINEYERAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7665; Mature: 7665
Theoretical pI: Translated: 11.53; Mature: 11.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIFGERHLRTVLADYARHYNGRRPHRGRDLQPPRPDHPVADLARERIKRRPVLAGLINE CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH YERAA HHHCC >Mature Secondary Structure MLIFGERHLRTVLADYARHYNGRRPHRGRDLQPPRPDHPVADLARERIKRRPVLAGLINE CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH YERAA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA