| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158314904
Identifier: 158314904
GI number: 158314904
Start: 3653407
End: 3653931
Strand: Direct
Name: 158314904
Synonym: Franean1_3094
Alternate gene names: NA
Gene position: 3653407-3653931 (Clockwise)
Preceding gene: 158314903
Following gene: 158314909
Centisome position: 40.67
GC content: 66.1
Gene sequence:
>525_bases GTGACGCGACAGTGTCCGATCGATCAGTCAGTCCTCGTCATCGCTGATGCCGTGCTGGGCCAGATGTACCTGTATCGCCC GTTCAAGGGCGTCGGTGTCGAGGCAGGCCGTCGTTCCCTTGGGGGAGACGACCGCTGCGAGGTGAATGGGCCAGGGGCAG ACCGGGCAGACCGCGACGAGCCTCGCCATCGGCAGAGCGGTCACCAGGCCAAGGTCACCATTGACGGGTTGCTGCCACCA CACCCTCTAGTACTACCCCACTGGCAGGCGGCATCCCGGTTACTTGAGGTGCGCGCGGTACCAGGGCCTGTTCCACCGGG CACCGACAGAGCCCGGGCGGGGGTGTCCGAGATCGGGCGGGTGCCGAGGTCCACGGCCGTGTCAAGGGCACGCTACGGGC AGTCCTACCGACTGGCCCTTCGGTCGTCCCTGACTCGGCCGCTCTACCCGGATGTAGGTCGCACGATCGCACAGCGGCCG GTTCAGTTCCTCATCGACCGTCGACATTTTCGATCTCTCGGGTGA
Upstream 100 bases:
>100_bases AACCACTCGTCGGCGCTCGGTGCCGAAGGCAGGCCGGTAGGACGCCGGGAAAACGCCGAAATTTCGAGCGGAGGGTCACG TCCGGAGGCGCAGCCGCGCG
Downstream 100 bases:
>100_bases GCCGCCGGCGACAAGGCGTCCCTGGTGGCGGGGCCAGTCAACCGCCGGGACCCCTTCCCGGGACGGCCCGCGGTTCCAAT TACATCGCTATGCCCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTRQCPIDQSVLVIADAVLGQMYLYRPFKGVGVEAGRRSLGGDDRCEVNGPGADRADRDEPRHRQSGHQAKVTIDGLLPP HPLVLPHWQAASRLLEVRAVPGPVPPGTDRARAGVSEIGRVPRSTAVSRARYGQSYRLALRSSLTRPLYPDVGRTIAQRP VQFLIDRRHFRSLG
Sequences:
>Translated_174_residues MTRQCPIDQSVLVIADAVLGQMYLYRPFKGVGVEAGRRSLGGDDRCEVNGPGADRADRDEPRHRQSGHQAKVTIDGLLPP HPLVLPHWQAASRLLEVRAVPGPVPPGTDRARAGVSEIGRVPRSTAVSRARYGQSYRLALRSSLTRPLYPDVGRTIAQRP VQFLIDRRHFRSLG >Mature_173_residues TRQCPIDQSVLVIADAVLGQMYLYRPFKGVGVEAGRRSLGGDDRCEVNGPGADRADRDEPRHRQSGHQAKVTIDGLLPPH PLVLPHWQAASRLLEVRAVPGPVPPGTDRARAGVSEIGRVPRSTAVSRARYGQSYRLALRSSLTRPLYPDVGRTIAQRPV QFLIDRRHFRSLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19186; Mature: 19055
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQCPIDQSVLVIADAVLGQMYLYRPFKGVGVEAGRRSLGGDDRCEVNGPGADRADRDE CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCC PRHRQSGHQAKVTIDGLLPPHPLVLPHWQAASRLLEVRAVPGPVPPGTDRARAGVSEIGR CHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHC VPRSTAVSRARYGQSYRLALRSSLTRPLYPDVGRTIAQRPVQFLIDRRHFRSLG CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRQCPIDQSVLVIADAVLGQMYLYRPFKGVGVEAGRRSLGGDDRCEVNGPGADRADRDE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCC PRHRQSGHQAKVTIDGLLPPHPLVLPHWQAASRLLEVRAVPGPVPPGTDRARAGVSEIGR CHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHC VPRSTAVSRARYGQSYRLALRSSLTRPLYPDVGRTIAQRPVQFLIDRRHFRSLG CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA