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The map label for this gene is insF1 [H]

Identifier: 158314899

GI number: 158314899

Start: 3647182

End: 3648072

Strand: Direct

Name: insF1 [H]

Synonym: Franean1_3089

Alternate gene names: 158314899

Gene position: 3647182-3648072 (Clockwise)

Preceding gene: 158314898

Following gene: 158314901

Centisome position: 40.61

GC content: 66.44

Gene sequence:

>891_bases
GTGACCGACAAGTACGAACTGATCGCCGCGGAGAAGGACAACTACCCGGTCACCAAGATGTGCCAGTGGCTCGTCGTGTC
GACATCCGGTTTCTACGACTGGCACCGCAGGCCCGCGTCGACCCGGACCCGTCGGCACACCACCCTCGACACCCACGTCC
GGGCGGTGTTCGCCGCCTCCCGCCAGACCTACGGCGCCCGGCGGATCGCCGCCGCCCTGACCGCCTCCGGCCTGCGCGTC
TCCGTCCGCCTCGCCCGACGGATCATGCGCCGCGCAGGGCTGGAAGCCTGCCAGCCCAGGGCCTACCGCCGCACCACCAT
CCCCGGCCAGGCCCCGGCGCCCGCCGACCACGTCCGCCGCGACTTCACCGCCACCCGCCCCGGCGAGAAGCTCATCGGGG
ACATCACCTATATCCGCACCGGCGAAGGATGGCTCTACCTCGCCACCGTCATCGACTGCTACTCCCGTAAAGTCGCCGGC
TGGTCGATGGCCACCCACCTGCGCACCGAGCTCATCATCGACGCGTTCACCATGGCCGCCTCCCGCACAACCCTCGCACC
GAACGCGCTTTTCCACTCCGATCGTGGCGCCCAATACACGTCGGATGCCTACCATCGCGTCCTGAAACGCCATGGAGTAC
GCCCGTCGGTCGGCGCCACCGGAGTCTGCTGGGACAATTCCGCTGCAGAGTCGTTCTTCGGAACGCTCAAGAACGAACTC
GTGTACCGGGAAAACTACCCAACCCGCCGCGCCGCACGTACCGCGATCGCCGAATACATCGAGGTCTTCTACAACCGGCA
GCGGCTCCACTCCACTCTCGGCTACCGCACTCCCGAAAACATCGAGCGCGCATACCACTCAACCCAGAACGAGGTGATAG
AAGCAGCATAA

Upstream 100 bases:

>100_bases
AACGGGCCCGGCTCCGCGAGCTGGAGAAGGAGAACCGGGAACTCCGGATGGAGCGCGAGTTCCTCTCAAAAGCGACCGCC
TTCTTCGCGCAACGCCATCA

Downstream 100 bases:

>100_bases
AGCTGCTATAGTCCGTCTACGTCCGTGTCCGAGAAAAGGGCAGCACCTCAGTCCTCTCCACGACACCCAAGTGCAGGCGT
GCGGCCTCCCGATACAGACG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTDKYELIAAEKDNYPVTKMCQWLVVSTSGFYDWHRRPASTRTRRHTTLDTHVRAVFAASRQTYGARRIAAALTASGLRV
SVRLARRIMRRAGLEACQPRAYRRTTIPGQAPAPADHVRRDFTATRPGEKLIGDITYIRTGEGWLYLATVIDCYSRKVAG
WSMATHLRTELIIDAFTMAASRTTLAPNALFHSDRGAQYTSDAYHRVLKRHGVRPSVGATGVCWDNSAAESFFGTLKNEL
VYRENYPTRRAARTAIAEYIEVFYNRQRLHSTLGYRTPENIERAYHSTQNEVIEAA

Sequences:

>Translated_296_residues
MTDKYELIAAEKDNYPVTKMCQWLVVSTSGFYDWHRRPASTRTRRHTTLDTHVRAVFAASRQTYGARRIAAALTASGLRV
SVRLARRIMRRAGLEACQPRAYRRTTIPGQAPAPADHVRRDFTATRPGEKLIGDITYIRTGEGWLYLATVIDCYSRKVAG
WSMATHLRTELIIDAFTMAASRTTLAPNALFHSDRGAQYTSDAYHRVLKRHGVRPSVGATGVCWDNSAAESFFGTLKNEL
VYRENYPTRRAARTAIAEYIEVFYNRQRLHSTLGYRTPENIERAYHSTQNEVIEAA
>Mature_295_residues
TDKYELIAAEKDNYPVTKMCQWLVVSTSGFYDWHRRPASTRTRRHTTLDTHVRAVFAASRQTYGARRIAAALTASGLRVS
VRLARRIMRRAGLEACQPRAYRRTTIPGQAPAPADHVRRDFTATRPGEKLIGDITYIRTGEGWLYLATVIDCYSRKVAGW
SMATHLRTELIIDAFTMAASRTTLAPNALFHSDRGAQYTSDAYHRVLKRHGVRPSVGATGVCWDNSAAESFFGTLKNELV
YRENYPTRRAARTAIAEYIEVFYNRQRLHSTLGYRTPENIERAYHSTQNEVIEAA

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=265, Percent_Identity=31.6981132075472, Blast_Score=132, Evalue=3e-31,
Organism=Escherichia coli, GI1788405, Length=282, Percent_Identity=40.4255319148936, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1787263, Length=282, Percent_Identity=40.4255319148936, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1786753, Length=282, Percent_Identity=40.4255319148936, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1786570, Length=282, Percent_Identity=40.4255319148936, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1786490, Length=282, Percent_Identity=40.4255319148936, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1789981, Length=269, Percent_Identity=29.368029739777, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 33580; Mature: 33449

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKYELIAAEKDNYPVTKMCQWLVVSTSGFYDWHRRPASTRTRRHTTLDTHVRAVFAAS
CCCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHCCHHHHHHHHHHHHH
RQTYGARRIAAALTASGLRVSVRLARRIMRRAGLEACQPRAYRRTTIPGQAPAPADHVRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHH
DFTATRPGEKLIGDITYIRTGEGWLYLATVIDCYSRKVAGWSMATHLRTELIIDAFTMAA
CCCCCCCCHHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SRTTLAPNALFHSDRGAQYTSDAYHRVLKRHGVRPSVGATGVCWDNSAAESFFGTLKNEL
CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHE
VYRENYPTRRAARTAIAEYIEVFYNRQRLHSTLGYRTPENIERAYHSTQNEVIEAA
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDKYELIAAEKDNYPVTKMCQWLVVSTSGFYDWHRRPASTRTRRHTTLDTHVRAVFAAS
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCHHHHCCHHHHHHHHHHHHH
RQTYGARRIAAALTASGLRVSVRLARRIMRRAGLEACQPRAYRRTTIPGQAPAPADHVRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHH
DFTATRPGEKLIGDITYIRTGEGWLYLATVIDCYSRKVAGWSMATHLRTELIIDAFTMAA
CCCCCCCCHHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SRTTLAPNALFHSDRGAQYTSDAYHRVLKRHGVRPSVGATGVCWDNSAAESFFGTLKNEL
CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHE
VYRENYPTRRAARTAIAEYIEVFYNRQRLHSTLGYRTPENIERAYHSTQNEVIEAA
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]