Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314901

Identifier: 158314901

GI number: 158314901

Start: 3649766

End: 3650128

Strand: Direct

Name: 158314901

Synonym: Franean1_3091

Alternate gene names: NA

Gene position: 3649766-3650128 (Clockwise)

Preceding gene: 158314899

Following gene: 158314903

Centisome position: 40.63

GC content: 64.19

Gene sequence:

>363_bases
GTGGGCCATCGTCTTGCCGTCGCTATCGTGCACGGACACTCGTCGCACCATCCACGGCCTGTCGAGATATACCGGGACAG
GCTCATCCTGCACGGGTGCGGCGATTTCATCGACGACTATGAGGGGATCGCCGGCTACGAAAGCTATCGGGACGACCTGC
GGCTGGCGTACTTCGTGTCGGTCGATCCGGGCAGCGGGAATCTGATCGACCTGCGTGTGATGCCCCTGCAGGCACGGCAG
ATGCGACTCCGGTACGCCGGCCCCGAAGACTCCGCCTGGCTACAGGAGATTCTTGACAGCATCAGCCGCGGCTTCGGGAC
ACGGTTCGGCCTTCAGGCGGACGGCATGCTCTCGCTCCGCTGA

Upstream 100 bases:

>100_bases
AGATCACTCGCGGCGCTGCGGCCGGCCTTCGTTGCTGACGCTGGCTTCTTGAGTCGCCCACGTTGCAGGACATTCAGCCC
ATCTCGCCGGAGTCGGAACT

Downstream 100 bases:

>100_bases
TCATGAGCGAAACCGAAGCCGCCCGCCGACCCGATGGGTGATGACGCCGTCGCCCTCGCCCGGCCCGGACAGGTCCCCGG
CCCGGGCCCGGGGCCGTCCT

Product: poly-gamma-glutamate synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MGHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVSVDPGSGNLIDLRVMPLQARQ
MRLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR

Sequences:

>Translated_120_residues
MGHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVSVDPGSGNLIDLRVMPLQARQ
MRLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR
>Mature_119_residues
GHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVSVDPGSGNLIDLRVMPLQARQM
RLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR

Specific function: Could be involved in the biosynthesis of a cell wall component (Potential) [H]

COG id: COG2843

COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019079 [H]

Pfam domain/function: PF09587 PGA_cap [H]

EC number: NA

Molecular weight: Translated: 13557; Mature: 13425

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVS
CCCEEEEEEEECCCCCCCCCHHHHHCEEEEECCCCHHHCCCCCCCCHHHHCCEEEEEEEE
VDPGSGNLIDLRVMPLQARQMRLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR
ECCCCCCEEEEEEECCCHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
GHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVS
CCEEEEEEEECCCCCCCCCHHHHHCEEEEECCCCHHHCCCCCCCCHHHHCCEEEEEEEE
VDPGSGNLIDLRVMPLQARQMRLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR
ECCCCCCEEEEEEECCCHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]