| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314901
Identifier: 158314901
GI number: 158314901
Start: 3649766
End: 3650128
Strand: Direct
Name: 158314901
Synonym: Franean1_3091
Alternate gene names: NA
Gene position: 3649766-3650128 (Clockwise)
Preceding gene: 158314899
Following gene: 158314903
Centisome position: 40.63
GC content: 64.19
Gene sequence:
>363_bases GTGGGCCATCGTCTTGCCGTCGCTATCGTGCACGGACACTCGTCGCACCATCCACGGCCTGTCGAGATATACCGGGACAG GCTCATCCTGCACGGGTGCGGCGATTTCATCGACGACTATGAGGGGATCGCCGGCTACGAAAGCTATCGGGACGACCTGC GGCTGGCGTACTTCGTGTCGGTCGATCCGGGCAGCGGGAATCTGATCGACCTGCGTGTGATGCCCCTGCAGGCACGGCAG ATGCGACTCCGGTACGCCGGCCCCGAAGACTCCGCCTGGCTACAGGAGATTCTTGACAGCATCAGCCGCGGCTTCGGGAC ACGGTTCGGCCTTCAGGCGGACGGCATGCTCTCGCTCCGCTGA
Upstream 100 bases:
>100_bases AGATCACTCGCGGCGCTGCGGCCGGCCTTCGTTGCTGACGCTGGCTTCTTGAGTCGCCCACGTTGCAGGACATTCAGCCC ATCTCGCCGGAGTCGGAACT
Downstream 100 bases:
>100_bases TCATGAGCGAAACCGAAGCCGCCCGCCGACCCGATGGGTGATGACGCCGTCGCCCTCGCCCGGCCCGGACAGGTCCCCGG CCCGGGCCCGGGGCCGTCCT
Product: poly-gamma-glutamate synthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MGHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVSVDPGSGNLIDLRVMPLQARQ MRLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR
Sequences:
>Translated_120_residues MGHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVSVDPGSGNLIDLRVMPLQARQ MRLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR >Mature_119_residues GHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVSVDPGSGNLIDLRVMPLQARQM RLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR
Specific function: Could be involved in the biosynthesis of a cell wall component (Potential) [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 13557; Mature: 13425
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVS CCCEEEEEEEECCCCCCCCCHHHHHCEEEEECCCCHHHCCCCCCCCHHHHCCEEEEEEEE VDPGSGNLIDLRVMPLQARQMRLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR ECCCCCCEEEEEEECCCHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECC >Mature Secondary Structure GHRLAVAIVHGHSSHHPRPVEIYRDRLILHGCGDFIDDYEGIAGYESYRDDLRLAYFVS CCEEEEEEEECCCCCCCCCHHHHHCEEEEECCCCHHHCCCCCCCCHHHHCCEEEEEEEE VDPGSGNLIDLRVMPLQARQMRLRYAGPEDSAWLQEILDSISRGFGTRFGLQADGMLSLR ECCCCCCEEEEEEECCCHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]