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The map label for this gene is iap [H]

Identifier: 158314886

GI number: 158314886

Start: 3630861

End: 3631556

Strand: Direct

Name: iap [H]

Synonym: Franean1_3076

Alternate gene names: 158314886

Gene position: 3630861-3631556 (Clockwise)

Preceding gene: 158314885

Following gene: 158314892

Centisome position: 40.42

GC content: 65.09

Gene sequence:

>696_bases
ATGACCAGCCCACCGACAGCCAAATCCGGCCGCAGCAGCACGGCCACCACTGCCATGGCACCAGCCGACCCAAGATGCCA
CACAGCCGTCGTCCCGTCCACGACCAGCCGATCAACGGTCGCGGCAGCCGTACCAGCCTTCCGACGACAGCTCAGGACCG
TTCACCGGCAAGCCAGGACCGAAAGATCACTGGACGTGTCGATGTCCAAACCGCGTATCCCAAGACTTCAGTATCCAGCT
CACGGCGCTGACCTACTGAAATGTTCGGCTGCGGTTGACAAGTACAGCTCGACCAGCGGCTTCGGCGCCGACACCGCCCC
GTCCGACGCTGGGTACGCCGCCGTCGTCTACGCCCAGGGCCAGCTCGGCATCCCCTACCTGTGGGGTGGGGACGGGCCGG
CCGAGGGCGGCTTCGACTGCTCCGGGCTGACCAGGGCCGCCTATCTTGCCGCCGGCATCGACCTGCCCCGCACCGCCCAG
ACCCAGTACGAAGCCGGGCCCGTGGTCCCGCCCGGGGAACCACTCCAGATCGGCGACCTCGTCTACTACGGCACCGCCAC
CAACATCCACCACGTCGCGATCTACATCGGAAACGGGCAGATGATCACAGCTCCAGGTCGTAACAAAGTTGTCAAAATCG
CCGGATACAGGTGGCAAGGAGACGATTATTTCGGGGCGACCAGGCCGGGCATGTAG

Upstream 100 bases:

>100_bases
GCTGCGCGAGCAGCTCATCGTCGCGTGGGTCGACGGGCATGACGGGCCGGACGGTCTACCAGTTCCGCCACATCGAACTG
CAACGCCGCCTTGCCAGCCG

Downstream 100 bases:

>100_bases
GGCGCGCATGCGCGTTCGACGCGATGCCCGACGAAGACTCGGGACCGAAGCGCCCGCCTCTGTCGACTGAGCCAGGTCGC
GTGGGTAGTCGGCCGAACAT

Product: NLP/P60 protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTSPPTAKSGRSSTATTAMAPADPRCHTAVVPSTTSRSTVAAAVPAFRRQLRTVHRQARTERSLDVSMSKPRIPRLQYPA
HGADLLKCSAAVDKYSSTSGFGADTAPSDAGYAAVVYAQGQLGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQ
TQYEAGPVVPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGRNKVVKIAGYRWQGDDYFGATRPGM

Sequences:

>Translated_231_residues
MTSPPTAKSGRSSTATTAMAPADPRCHTAVVPSTTSRSTVAAAVPAFRRQLRTVHRQARTERSLDVSMSKPRIPRLQYPA
HGADLLKCSAAVDKYSSTSGFGADTAPSDAGYAAVVYAQGQLGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQ
TQYEAGPVVPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGRNKVVKIAGYRWQGDDYFGATRPGM
>Mature_230_residues
TSPPTAKSGRSSTATTAMAPADPRCHTAVVPSTTSRSTVAAAVPAFRRQLRTVHRQARTERSLDVSMSKPRIPRLQYPAH
GADLLKCSAAVDKYSSTSGFGADTAPSDAGYAAVVYAQGQLGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQT
QYEAGPVVPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGRNKVVKIAGYRWQGDDYFGATRPGM

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=206, Percent_Identity=30.5825242718447, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786421, Length=129, Percent_Identity=36.4341085271318, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 24274; Mature: 24142

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPPTAKSGRSSTATTAMAPADPRCHTAVVPSTTSRSTVAAAVPAFRRQLRTVHRQART
CCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ERSLDVSMSKPRIPRLQYPAHGADLLKCSAAVDKYSSTSGFGADTAPSDAGYAAVVYAQG
HCCCEEECCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC
QLGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQTQYEAGPVVPPGEPLQIGDL
CCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCE
VYYGTATNIHHVAIYIGNGQMITAPGRNKVVKIAGYRWQGDDYFGATRPGM
EEECCCCCEEEEEEEECCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TSPPTAKSGRSSTATTAMAPADPRCHTAVVPSTTSRSTVAAAVPAFRRQLRTVHRQART
CCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ERSLDVSMSKPRIPRLQYPAHGADLLKCSAAVDKYSSTSGFGADTAPSDAGYAAVVYAQG
HCCCEEECCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC
QLGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQTQYEAGPVVPPGEPLQIGDL
CCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCE
VYYGTATNIHHVAIYIGNGQMITAPGRNKVVKIAGYRWQGDDYFGATRPGM
EEECCCCCEEEEEEEECCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]