| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314882
Identifier: 158314882
GI number: 158314882
Start: 3626505
End: 3627599
Strand: Direct
Name: 158314882
Synonym: Franean1_3072
Alternate gene names: NA
Gene position: 3626505-3627599 (Clockwise)
Preceding gene: 158314881
Following gene: 158314884
Centisome position: 40.38
GC content: 71.51
Gene sequence:
>1095_bases GTGGCCCGGGTCGAGCGCCGGCAGGTCTTCGACCTGCCCGTCCTACGCGCCCACGTCACCGAACACGAACTGGTGGAGCG GGCCTGCGGCTGCGGGGCGCACACGAAGGCCGCCGCGCCGGACGGGGTGAACGCCCCGGTCCAGTACGGGCCGCGGGTGA CCGCGGCGGCGGTCTACCTGTACGCGGGCCAGTTCCTGTCGAAGGACCGGACCGCGACCGCATTGGGTGAGCTGGTCGGG ATTGGGCTGTCGGCGGGCACGGTCGCGGCGATGGCCGCCCGTGCCGCCGCCAACCTGGAGGGTTTCCTCACCGCCGTCCG TGGCCTGCTCACCGCCGCCGAGGTGATCGGCGCGGACGAGACCGGGCTACGGGTCGCCGGCAGGTTGCACTGGGTGCACG TCGCCCGCACCGGGAAGTACACGCTGATCGACTGCCATCCGAAACGCGGAACCGCCGGGATCGACGCCCTCGGGGTGCTG ACCGGCTTCGGCGGGGTCGTGGTCCACGACGCCTGGTCCCCGTATGACACCTACACCACCGCCACCCACCAGCTCTGTGT CGCTCACGTGCTGCGCGAGCTGCAGGCCGTGAGTGACGCCGCCCCGGCGGGGGGCTGGTGCTGGGCCACCCAGGCCGCCG ACGCCCTCGTCGCGCTGCACCGTCTCACCGTCAACGCCGCCGCCACCGGCACGCCGACCGACCGACCTGGCGGCCCACAC CCGGGCCCTGCGCCACGCCGCCCACATCGGGATCACCCAGACCTCACCGCGGGGCACGAAACTCATGGCCGCCCGCCACG CCCTGGCCTGCCGCCTCGTCGACCGCGAAGCCGACTACCTGCGGTTCACCCACGACCCGCGGATACCCGCGGACAACAAC GGCTCCGAACGCGACATCCGCATGATCAAACTACGGCAGAAAGTATCCGGGTGCCTACGCACCCTCACCAGCGCCCGTCA GTTCTGCGCGATCCGCAGCTACCTGTCCACCGCCACCAAACACGGCATCGGCCTGTTCCCCGCCCTCGTTCAACTCGCCG AGGGCCGCCCCTGGACGCCCGCAACCAGCTAACCCAACATCAAATCGGTACCTGA
Upstream 100 bases:
>100_bases TCCCGGGTCGACGCTGTGCCTGGTGGATGATCCTGATGTGCGTCTGCGGCACGAACCGGGGCCGTGTGCGGGTTGTGGGT CGTCGCTTTCGGGTCGGCCG
Downstream 100 bases:
>100_bases CCAGTTACCGCCAGGTTACGGAAGCTGGCGAGCGTGTGTGGACTATTTCCTGTGTGGGTCTGGTTGGCGTCCTCGCGCCA CGCGGTGTCGCGCGGGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS; Transposase Is; Archae-Like Transposase; Transposase Of
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MARVERRQVFDLPVLRAHVTEHELVERACGCGAHTKAAAPDGVNAPVQYGPRVTAAAVYLYAGQFLSKDRTATALGELVG IGLSAGTVAAMAARAAANLEGFLTAVRGLLTAAEVIGADETGLRVAGRLHWVHVARTGKYTLIDCHPKRGTAGIDALGVL TGFGGVVVHDAWSPYDTYTTATHQLCVAHVLRELQAVSDAAPAGGWCWATQAADALVALHRLTVNAAATGTPTDRPGGPH PGPAPRRPHRDHPDLTAGHETHGRPPRPGLPPRRPRSRLPAVHPRPADTRGQQRLRTRHPHDQTTAESIRVPTHPHQRPS VLRDPQLPVHRHQTRHRPVPRPRSTRRGPPLDARNQLTQHQIGT
Sequences:
>Translated_364_residues MARVERRQVFDLPVLRAHVTEHELVERACGCGAHTKAAAPDGVNAPVQYGPRVTAAAVYLYAGQFLSKDRTATALGELVG IGLSAGTVAAMAARAAANLEGFLTAVRGLLTAAEVIGADETGLRVAGRLHWVHVARTGKYTLIDCHPKRGTAGIDALGVL TGFGGVVVHDAWSPYDTYTTATHQLCVAHVLRELQAVSDAAPAGGWCWATQAADALVALHRLTVNAAATGTPTDRPGGPH PGPAPRRPHRDHPDLTAGHETHGRPPRPGLPPRRPRSRLPAVHPRPADTRGQQRLRTRHPHDQTTAESIRVPTHPHQRPS VLRDPQLPVHRHQTRHRPVPRPRSTRRGPPLDARNQLTQHQIGT >Mature_363_residues ARVERRQVFDLPVLRAHVTEHELVERACGCGAHTKAAAPDGVNAPVQYGPRVTAAAVYLYAGQFLSKDRTATALGELVGI GLSAGTVAAMAARAAANLEGFLTAVRGLLTAAEVIGADETGLRVAGRLHWVHVARTGKYTLIDCHPKRGTAGIDALGVLT GFGGVVVHDAWSPYDTYTTATHQLCVAHVLRELQAVSDAAPAGGWCWATQAADALVALHRLTVNAAATGTPTDRPGGPHP GPAPRRPHRDHPDLTAGHETHGRPPRPGLPPRRPRSRLPAVHPRPADTRGQQRLRTRHPHDQTTAESIRVPTHPHQRPSV LRDPQLPVHRHQTRHRPVPRPRSTRRGPPLDARNQLTQHQIGT
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39173; Mature: 39042
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVERRQVFDLPVLRAHVTEHELVERACGCGAHTKAAAPDGVNAPVQYGPRVTAAAVYL CCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHH YAGQFLSKDRTATALGELVGIGLSAGTVAAMAARAAANLEGFLTAVRGLLTAAEVIGADE HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TGLRVAGRLHWVHVARTGKYTLIDCHPKRGTAGIDALGVLTGFGGVVVHDAWSPYDTYTT CCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHH ATHQLCVAHVLRELQAVSDAAPAGGWCWATQAADALVALHRLTVNAAATGTPTDRPGGPH HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PGPAPRRPHRDHPDLTAGHETHGRPPRPGLPPRRPRSRLPAVHPRPADTRGQQRLRTRHP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHCCC HDQTTAESIRVPTHPHQRPSVLRDPQLPVHRHQTRHRPVPRPRSTRRGPPLDARNQLTQH CCCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH QIGT CCCC >Mature Secondary Structure ARVERRQVFDLPVLRAHVTEHELVERACGCGAHTKAAAPDGVNAPVQYGPRVTAAAVYL CCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHH YAGQFLSKDRTATALGELVGIGLSAGTVAAMAARAAANLEGFLTAVRGLLTAAEVIGADE HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TGLRVAGRLHWVHVARTGKYTLIDCHPKRGTAGIDALGVLTGFGGVVVHDAWSPYDTYTT CCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHH ATHQLCVAHVLRELQAVSDAAPAGGWCWATQAADALVALHRLTVNAAATGTPTDRPGGPH HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PGPAPRRPHRDHPDLTAGHETHGRPPRPGLPPRRPRSRLPAVHPRPADTRGQQRLRTRHP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHCCC HDQTTAESIRVPTHPHQRPSVLRDPQLPVHRHQTRHRPVPRPRSTRRGPPLDARNQLTQH CCCCCHHHEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH QIGT CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA