Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314875

Identifier: 158314875

GI number: 158314875

Start: 3619848

End: 3621182

Strand: Direct

Name: 158314875

Synonym: Franean1_3065

Alternate gene names: NA

Gene position: 3619848-3621182 (Clockwise)

Preceding gene: 158314863

Following gene: 158314877

Centisome position: 40.3

GC content: 67.79

Gene sequence:

>1335_bases
ATGGCGATCATGGGGGATGTTCTGGACCAGCTGTCTCGTCGGTTCGCGGTGGTGCTGCCGCACCTCGACGAGCGGCAGCG
GCGACTGGTGCTGGCAACCGAAGCCCGGCTGCTGGGGCATGGCGGTATCCGCGCGGTGGCCCGAGTCGCCGGTGTCAGCG
AGACCACGGTCCGCGTCGGCGTGTTCGAGCTCGAAGCGGGCGGGGAACCCCTGCCCGATCGACGAGTCCGCCGGCCAGGT
GGGGGCCGTAAACGCATCGAGGACACCGACCCGGCCGTGGTGACAGCGCTCCTCGCACTCGTCGAGCCGGACGAGCGAGG
TGATCCGACCTCACCGCTGCGGTGGACCACGAAGTCGCTACGACACCTCGCCGAACAGCTCACCCGCCAAGGGCACCCGG
TATCGCCGTCGACAGTCCGCCGGCTCTTGCAGGCGGCTGGTTTCAGCCTGCAGGCGAACTCCAAAACCCTGGAAGGAAAG
CAGCACCCCGACCGGGACGCCCAGTTCCGCTACCTGAACAACCAGGTCATGGAACATCAGAAAGTCGGCGAGCCGGTCAT
CAGCGTGGACGCGAAAAAGAAGGAGATGCTCGGCCAGCTCCCGAACCCGGGCCGTGAATGGCGACCGAAAGGCGACCCTG
TCCAGGTCGAGGATCACAGCTTCTTCACCGGCCCGCAGGGCGACACCGCCATCCCCTACGGCGTCTACGACCTGACCACC
GACGCCGGCTGGGTCAACGTCGGGGTCGACCACGACACCTCAGCGTTCGCGGTGGCCTCGATCCGCCGCTGGTGGCAGGC
CCGCGGCCAGGCCGACTACCCCCAGGCCACCCGGCTGCTGGTCACCGCGGACGCGGGCGGGTCGAATAGCTACCGCTTTC
GAGCTTGGAAAGCCGAACTCGCCGCGCTCGCCGCCGACACCGGCCTGACGATCACCGTGTGTCATTTTCCGCCCGGCACG
TCGAAATGGAGTCGCGGTAGGGACCGCCCTTGCGGGCGGCCCCCCGCACAGATCCCAGCGTGCGGGACTACCGCACTGGG
CTCCTGCCTCAGGTTCTGGCTGCGAAGCGTCTCTCCGGGAAGGGATGCATCACTCGGACTGGGGGTAGCCATCGAGCCGC
GATCCGCCCCATCCGTTGCCAGTTCATCCGGTCACGTTGGCTGCGGCGCCGCAGCGCCTTGCACCAGTGCCGTGTCACCT
GGGTACGGAAGGCCGACATCGTGTCGGTGTTGCCGGGCACGGCGTAGTAGGCCATATGCCCACGTAGCACGCTCGCCAAC
CAGCGTCCCTGATCCGGGATGGGCGTATGCCGGCGACGCTTCAGCTGCTCATTGA

Upstream 100 bases:

>100_bases
GGGTCGACCCTGCCCGGTGCGTCGTGGCAGAGATGTCGGACTCATTGGGCCTGTGCAGGAACAACCTGGTGGTTCGACCT
GTCTGGTTCGATGTCGTGCT

Downstream 100 bases:

>100_bases
CCGCCTTCAGCTTCGCCCGCATGCGTTTCGCGATCGTGATGCGCTTGAGCCAGAACGTCCCCCTCCGGGATGTCGCACAG
ATGTGCGTGAACCCCAGAAA

Product: transposase

Products: NA

Alternate protein names: Rhodopirellula Transposase; IS3 Family ISVisp1-Like Transposase; Transposase C-Terminal; LOW QUALITY PROTEIN Rhodopirellula Transposase; Transposase Family Protein; Rhodopirellula Transposase Family Protein; Transposase N-Terminal

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MAIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVGVFELEAGGEPLPDRRVRRPG
GGRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSLRHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGK
QHPDRDAQFRYLNNQVMEHQKVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTT
DAGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAELAALAADTGLTITVCHFPPGT
SKWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPGRDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSP
GYGRPTSCRCCRARRSRPYAHVARSPTSVPDPGWAYAGDASAAH

Sequences:

>Translated_444_residues
MAIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVGVFELEAGGEPLPDRRVRRPG
GGRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSLRHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGK
QHPDRDAQFRYLNNQVMEHQKVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTT
DAGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAELAALAADTGLTITVCHFPPGT
SKWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPGRDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSP
GYGRPTSCRCCRARRSRPYAHVARSPTSVPDPGWAYAGDASAAH
>Mature_443_residues
AIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVGVFELEAGGEPLPDRRVRRPGG
GRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSLRHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGKQ
HPDRDAQFRYLNNQVMEHQKVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTTD
AGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAELAALAADTGLTITVCHFPPGTS
KWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPGRDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSPG
YGRPTSCRCCRARRSRPYAHVARSPTSVPDPGWAYAGDASAAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47841; Mature: 47710

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVG
CCCHHHHHHHHHHHHEEECCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHCCCCCEEEEE
VFELEAGGEPLPDRRVRRPGGGRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSL
EEEECCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
RHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGKQHPDRDAQFRYLNNQVMEHQ
HHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
KVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTT
HHCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCCCEEEECC
DAGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAEL
CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHH
AALAADTGLTITVCHFPPGTSKWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPG
HHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
RDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSPGYGRPTSCRCCRARRSRPYA
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH
HVARSPTSVPDPGWAYAGDASAAH
HHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVG
CCHHHHHHHHHHHHEEECCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHCCCCCEEEEE
VFELEAGGEPLPDRRVRRPGGGRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSL
EEEECCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
RHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGKQHPDRDAQFRYLNNQVMEHQ
HHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
KVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTT
HHCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCCCEEEECC
DAGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAEL
CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHH
AALAADTGLTITVCHFPPGTSKWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPG
HHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
RDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSPGYGRPTSCRCCRARRSRPYA
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH
HVARSPTSVPDPGWAYAGDASAAH
HHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA