| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314875
Identifier: 158314875
GI number: 158314875
Start: 3619848
End: 3621182
Strand: Direct
Name: 158314875
Synonym: Franean1_3065
Alternate gene names: NA
Gene position: 3619848-3621182 (Clockwise)
Preceding gene: 158314863
Following gene: 158314877
Centisome position: 40.3
GC content: 67.79
Gene sequence:
>1335_bases ATGGCGATCATGGGGGATGTTCTGGACCAGCTGTCTCGTCGGTTCGCGGTGGTGCTGCCGCACCTCGACGAGCGGCAGCG GCGACTGGTGCTGGCAACCGAAGCCCGGCTGCTGGGGCATGGCGGTATCCGCGCGGTGGCCCGAGTCGCCGGTGTCAGCG AGACCACGGTCCGCGTCGGCGTGTTCGAGCTCGAAGCGGGCGGGGAACCCCTGCCCGATCGACGAGTCCGCCGGCCAGGT GGGGGCCGTAAACGCATCGAGGACACCGACCCGGCCGTGGTGACAGCGCTCCTCGCACTCGTCGAGCCGGACGAGCGAGG TGATCCGACCTCACCGCTGCGGTGGACCACGAAGTCGCTACGACACCTCGCCGAACAGCTCACCCGCCAAGGGCACCCGG TATCGCCGTCGACAGTCCGCCGGCTCTTGCAGGCGGCTGGTTTCAGCCTGCAGGCGAACTCCAAAACCCTGGAAGGAAAG CAGCACCCCGACCGGGACGCCCAGTTCCGCTACCTGAACAACCAGGTCATGGAACATCAGAAAGTCGGCGAGCCGGTCAT CAGCGTGGACGCGAAAAAGAAGGAGATGCTCGGCCAGCTCCCGAACCCGGGCCGTGAATGGCGACCGAAAGGCGACCCTG TCCAGGTCGAGGATCACAGCTTCTTCACCGGCCCGCAGGGCGACACCGCCATCCCCTACGGCGTCTACGACCTGACCACC GACGCCGGCTGGGTCAACGTCGGGGTCGACCACGACACCTCAGCGTTCGCGGTGGCCTCGATCCGCCGCTGGTGGCAGGC CCGCGGCCAGGCCGACTACCCCCAGGCCACCCGGCTGCTGGTCACCGCGGACGCGGGCGGGTCGAATAGCTACCGCTTTC GAGCTTGGAAAGCCGAACTCGCCGCGCTCGCCGCCGACACCGGCCTGACGATCACCGTGTGTCATTTTCCGCCCGGCACG TCGAAATGGAGTCGCGGTAGGGACCGCCCTTGCGGGCGGCCCCCCGCACAGATCCCAGCGTGCGGGACTACCGCACTGGG CTCCTGCCTCAGGTTCTGGCTGCGAAGCGTCTCTCCGGGAAGGGATGCATCACTCGGACTGGGGGTAGCCATCGAGCCGC GATCCGCCCCATCCGTTGCCAGTTCATCCGGTCACGTTGGCTGCGGCGCCGCAGCGCCTTGCACCAGTGCCGTGTCACCT GGGTACGGAAGGCCGACATCGTGTCGGTGTTGCCGGGCACGGCGTAGTAGGCCATATGCCCACGTAGCACGCTCGCCAAC CAGCGTCCCTGATCCGGGATGGGCGTATGCCGGCGACGCTTCAGCTGCTCATTGA
Upstream 100 bases:
>100_bases GGGTCGACCCTGCCCGGTGCGTCGTGGCAGAGATGTCGGACTCATTGGGCCTGTGCAGGAACAACCTGGTGGTTCGACCT GTCTGGTTCGATGTCGTGCT
Downstream 100 bases:
>100_bases CCGCCTTCAGCTTCGCCCGCATGCGTTTCGCGATCGTGATGCGCTTGAGCCAGAACGTCCCCCTCCGGGATGTCGCACAG ATGTGCGTGAACCCCAGAAA
Product: transposase
Products: NA
Alternate protein names: Rhodopirellula Transposase; IS3 Family ISVisp1-Like Transposase; Transposase C-Terminal; LOW QUALITY PROTEIN Rhodopirellula Transposase; Transposase Family Protein; Rhodopirellula Transposase Family Protein; Transposase N-Terminal
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MAIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVGVFELEAGGEPLPDRRVRRPG GGRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSLRHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGK QHPDRDAQFRYLNNQVMEHQKVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTT DAGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAELAALAADTGLTITVCHFPPGT SKWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPGRDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSP GYGRPTSCRCCRARRSRPYAHVARSPTSVPDPGWAYAGDASAAH
Sequences:
>Translated_444_residues MAIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVGVFELEAGGEPLPDRRVRRPG GGRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSLRHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGK QHPDRDAQFRYLNNQVMEHQKVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTT DAGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAELAALAADTGLTITVCHFPPGT SKWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPGRDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSP GYGRPTSCRCCRARRSRPYAHVARSPTSVPDPGWAYAGDASAAH >Mature_443_residues AIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVGVFELEAGGEPLPDRRVRRPGG GRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSLRHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGKQ HPDRDAQFRYLNNQVMEHQKVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTTD AGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAELAALAADTGLTITVCHFPPGTS KWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPGRDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSPG YGRPTSCRCCRARRSRPYAHVARSPTSVPDPGWAYAGDASAAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47841; Mature: 47710
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVG CCCHHHHHHHHHHHHEEECCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHCCCCCEEEEE VFELEAGGEPLPDRRVRRPGGGRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSL EEEECCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGKQHPDRDAQFRYLNNQVMEHQ HHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH KVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTT HHCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCCCEEEECC DAGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAEL CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHH AALAADTGLTITVCHFPPGTSKWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPG HHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC RDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSPGYGRPTSCRCCRARRSRPYA CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH HVARSPTSVPDPGWAYAGDASAAH HHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AIMGDVLDQLSRRFAVVLPHLDERQRRLVLATEARLLGHGGIRAVARVAGVSETTVRVG CCHHHHHHHHHHHHEEECCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHCCCCCEEEEE VFELEAGGEPLPDRRVRRPGGGRKRIEDTDPAVVTALLALVEPDERGDPTSPLRWTTKSL EEEECCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RHLAEQLTRQGHPVSPSTVRRLLQAAGFSLQANSKTLEGKQHPDRDAQFRYLNNQVMEHQ HHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH KVGEPVISVDAKKKEMLGQLPNPGREWRPKGDPVQVEDHSFFTGPQGDTAIPYGVYDLTT HHCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCCCEEEECC DAGWVNVGVDHDTSAFAVASIRRWWQARGQADYPQATRLLVTADAGGSNSYRFRAWKAEL CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHH AALAADTGLTITVCHFPPGTSKWSRGRDRPCGRPPAQIPACGTTALGSCLRFWLRSVSPG HHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC RDASLGLGVAIEPRSAPSVASSSGHVGCGAAAPCTSAVSPGYGRPTSCRCCRARRSRPYA CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH HVARSPTSVPDPGWAYAGDASAAH HHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA