Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314877

Identifier: 158314877

GI number: 158314877

Start: 3622760

End: 3623425

Strand: Direct

Name: 158314877

Synonym: Franean1_3067

Alternate gene names: NA

Gene position: 3622760-3623425 (Clockwise)

Preceding gene: 158314875

Following gene: 158314880

Centisome position: 40.33

GC content: 67.42

Gene sequence:

>666_bases
ATGAACTGGCGAGGCAGGCCACTGACCAGCCACGAAGTCGTCGTGAACACCATCGCGGCGACCCGAACCCGCAGCGGACT
ACGTGTCGAAGCGCACCTGGACACCAGGGACTATCCGATCGGCGTCGCCGTCAGCAAAGCCCGCATCGATGCCCTACCGA
TCGAACACCACACGATGCACAGAACATGGAACTACACAATCCACCCCACACACACCGACGGCACGGCCCCACCCGCCGTT
AACGCCGCGACCGGTTCAGACCGGGCAGCGACCCTGACGCTGCTGGCCCACCCGCGCCTGACCGGCATGAGCATCACCGA
GTTGGACGCACTCGCAGAACAGCTGGCGCCGGAACAGGCGGCCCGCCGGGAGCAGCGCCGCTACCAGGGACGCGGCGGAC
CACGTCGCCACGCCCCCGGCGCCCACGGCAGAACCCTGCTCTCGCCCCGCGACCGGGTCCTGATCACCGTCGTTCACCTG
CGCCAGGTCTGCTCTCAACGGCTCCTGGCGGACATGCTGGAAGTCGCAGCGCGGACGATCGGTCAGGCGGTCACCGACGT
CCGGCATCTCCTGCACGAGCAGAACATCACGATCACGCCGACAACCCTGCGGTTCACCTGCGCCGAGCAGGTCACTGCCT
ACGCGCGCACCGGACAGTACGACTGA

Upstream 100 bases:

>100_bases
TCGCTAGCCCTTCGACGCAGAGCTCTTCCATCTCCTCCTCCATGCCGGTTTATCCCGGCGCTTTCACAAAATCGAACATC
GATTGTTCTCCCAGATCACC

Downstream 100 bases:

>100_bases
TGTGCCCCGTTAATTCCGGACAGTCGTTATAGGTCTGGGCTATGCGGCGGTCTGCCTTTTCAGGTACTCGTCGTGGACCT
GCTGCGGGGTTCGGTAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Rhodopirellula Transposase; IS3 Family ISVisp1-Like Transposase; Transposase Family Protein; Rhodopirellula Transposase Family Protein

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMHRTWNYTIHPTHTDGTAPPAV
NAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQAARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHL
RQVCSQRLLADMLEVAARTIGQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD

Sequences:

>Translated_221_residues
MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMHRTWNYTIHPTHTDGTAPPAV
NAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQAARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHL
RQVCSQRLLADMLEVAARTIGQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD
>Mature_221_residues
MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMHRTWNYTIHPTHTDGTAPPAV
NAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQAARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHL
RQVCSQRLLADMLEVAARTIGQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24511; Mature: 24511

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMH
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECHHHEECCCCCHHEE
RTWNYTIHPTHTDGTAPPAVNAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQA
EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCHHHH
ARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHLRQVCSQRLLADMLEVAARTI
HHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
GQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD
HHHHHHHHHHHHHCCCEECCCEEEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNWRGRPLTSHEVVVNTIAATRTRSGLRVEAHLDTRDYPIGVAVSKARIDALPIEHHTMH
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECHHHEECCCCCHHEE
RTWNYTIHPTHTDGTAPPAVNAATGSDRAATLTLLAHPRLTGMSITELDALAEQLAPEQA
EEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCHHHH
ARREQRRYQGRGGPRRHAPGAHGRTLLSPRDRVLITVVHLRQVCSQRLLADMLEVAARTI
HHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
GQAVTDVRHLLHEQNITITPTTLRFTCAEQVTAYARTGQYD
HHHHHHHHHHHHHCCCEECCCEEEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA