| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314765
Identifier: 158314765
GI number: 158314765
Start: 3468102
End: 3469235
Strand: Direct
Name: 158314765
Synonym: Franean1_2947
Alternate gene names: NA
Gene position: 3468102-3469235 (Clockwise)
Preceding gene: 158314764
Following gene: 158314766
Centisome position: 38.61
GC content: 67.81
Gene sequence:
>1134_bases ATGACCGACCACACCTCAACCATCGAACCCACCGCTGCGCCGCGGACGCTGACCGTCCCGACAGCCGCCGCTCCGGTCCG TTCGGAAGAAGTCGACTGGGCGCTCGGTCCCGGCTCGGTTACCTGGGAAGTCATGAAGGACCCTGCCGTGTTCCTGGTCG GGCTGCTTCGAGAGGCCATTCTCCTGACGCTTCACCCACCGTTCGCCGCCGCCGCGATAGATCATGACAGCTTTCTGGAT GACCCGGTGATGAGGTTCCGGCGAGTGGCCATGTACGCCTACTCGGCCACGTACGGCACCAAGGCTGACGCCGAGAGGGT CAGCGCGATGGTGCGTCGGCGGCACTTCCAGATCGTGGGCGTCGAGCCTCTGAGCGGCGAGCCGTACCGGGCAGACTCGG AGTACGAGCTGGCATTGACCCAGGCCATGCTGGCGGCGTCGTTCCTGGCGGTGTACGAGGAAGTCCACGGCCGCCTCTCC ACCGCCCGACGTGACCAGTTCCTCATGGAGCAGAAGGTGCCCGCGGCGCTGCTGGGCGTACCGCCCGAGCACATGCCCTC GACGTGGGGTGATCTTCAGCGGTTCCTCGCCAGGGCGCGGGACGGCTTCGCCACCGGCTACCAGGCCCGGGAGATCATCG ATCCCTTCTCCCGAGGCAGCTACCCGCCTGGTAGCGTGCTCGGGGACCTGCCGACACTGAAGCGACAGGCCGCTATGTGG CTGATCCGGGCGATCGCCGACATGGCCATTCTCACCATGAACGATGAGGAACGCGCCCTCCTCGCGATCGACCGACGGCC CAAGCTGCGGTCGCAGGCAGCAATCCGGCTCTCGCTCAGGGCACTGTCCCGGTACCTGCGTAGCGAGAAGGGAACGCTCG CCTTCGAGGGGTTCGTCAAGGCGAACACCGCGAAGATCATGCGGCGAGCCTTCGAGGTCGACAGGAAGCCGGGCCGCCGT GCCCGGGAAAAGGCATTCCGGGTCCCGGACGCCGCCGGCTTCGTCGTCCAGCTGCCCGACCTCGTGCACAACTGGCCTGG CTCCCGGAGCATCGCCGAGCAGCCGAAGCCAGTGGAGGGCCCGTCGGCTCACGAGACTCGAGCCGGGGCCGGGAGAGCCC GCCGCGCCGGATGA
Upstream 100 bases:
>100_bases GTCTACGACGAGGCGGTCCCGGCCCCCACGTGGTCGACGCCCGACGTCTCCCTCACGCAGTGACGCTACATCGGTTCCGC TCTGCAGAAGAGGTTTTGAC
Downstream 100 bases:
>100_bases GTGGCGGCCCCCCGACTCGTTCGACCGACTGACAGAACCGGATAGGCAGATGGGCGAAGAAGCCAAAAGCGCGAACGCAC GGACCGGTCCTCTGGCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MTDHTSTIEPTAAPRTLTVPTAAAPVRSEEVDWALGPGSVTWEVMKDPAVFLVGLLREAILLTLHPPFAAAAIDHDSFLD DPVMRFRRVAMYAYSATYGTKADAERVSAMVRRRHFQIVGVEPLSGEPYRADSEYELALTQAMLAASFLAVYEEVHGRLS TARRDQFLMEQKVPAALLGVPPEHMPSTWGDLQRFLARARDGFATGYQAREIIDPFSRGSYPPGSVLGDLPTLKRQAAMW LIRAIADMAILTMNDEERALLAIDRRPKLRSQAAIRLSLRALSRYLRSEKGTLAFEGFVKANTAKIMRRAFEVDRKPGRR AREKAFRVPDAAGFVVQLPDLVHNWPGSRSIAEQPKPVEGPSAHETRAGAGRARRAG
Sequences:
>Translated_377_residues MTDHTSTIEPTAAPRTLTVPTAAAPVRSEEVDWALGPGSVTWEVMKDPAVFLVGLLREAILLTLHPPFAAAAIDHDSFLD DPVMRFRRVAMYAYSATYGTKADAERVSAMVRRRHFQIVGVEPLSGEPYRADSEYELALTQAMLAASFLAVYEEVHGRLS TARRDQFLMEQKVPAALLGVPPEHMPSTWGDLQRFLARARDGFATGYQAREIIDPFSRGSYPPGSVLGDLPTLKRQAAMW LIRAIADMAILTMNDEERALLAIDRRPKLRSQAAIRLSLRALSRYLRSEKGTLAFEGFVKANTAKIMRRAFEVDRKPGRR AREKAFRVPDAAGFVVQLPDLVHNWPGSRSIAEQPKPVEGPSAHETRAGAGRARRAG >Mature_376_residues TDHTSTIEPTAAPRTLTVPTAAAPVRSEEVDWALGPGSVTWEVMKDPAVFLVGLLREAILLTLHPPFAAAAIDHDSFLDD PVMRFRRVAMYAYSATYGTKADAERVSAMVRRRHFQIVGVEPLSGEPYRADSEYELALTQAMLAASFLAVYEEVHGRLST ARRDQFLMEQKVPAALLGVPPEHMPSTWGDLQRFLARARDGFATGYQAREIIDPFSRGSYPPGSVLGDLPTLKRQAAMWL IRAIADMAILTMNDEERALLAIDRRPKLRSQAAIRLSLRALSRYLRSEKGTLAFEGFVKANTAKIMRRAFEVDRKPGRRA REKAFRVPDAAGFVVQLPDLVHNWPGSRSIAEQPKPVEGPSAHETRAGAGRARRAG
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41739; Mature: 41608
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHTSTIEPTAAPRTLTVPTAAAPVRSEEVDWALGPGSVTWEVMKDPAVFLVGLLREAI CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCEEEHHHHCHHHHHHHHHHHHH LLTLHPPFAAAAIDHDSFLDDPVMRFRRVAMYAYSATYGTKADAERVSAMVRRRHFQIVG HEEECCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEE VEPLSGEPYRADSEYELALTQAMLAASFLAVYEEVHGRLSTARRDQFLMEQKVPAALLGV ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC PPEHMPSTWGDLQRFLARARDGFATGYQAREIIDPFSRGSYPPGSVLGDLPTLKRQAAMW CHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCHHHCCCCCCCHHHCCCHHHHHHHHHH LIRAIADMAILTMNDEERALLAIDRRPKLRSQAAIRLSLRALSRYLRSEKGTLAFEGFVK HHHHHHHHHEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH ANTAKIMRRAFEVDRKPGRRAREKAFRVPDAAGFVVQLPDLVHNWPGSRSIAEQPKPVEG HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCCHHCCCCCCCC PSAHETRAGAGRARRAG CCCCCHHCCCCCCCCCC >Mature Secondary Structure TDHTSTIEPTAAPRTLTVPTAAAPVRSEEVDWALGPGSVTWEVMKDPAVFLVGLLREAI CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCEEEHHHHCHHHHHHHHHHHHH LLTLHPPFAAAAIDHDSFLDDPVMRFRRVAMYAYSATYGTKADAERVSAMVRRRHFQIVG HEEECCCHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEE VEPLSGEPYRADSEYELALTQAMLAASFLAVYEEVHGRLSTARRDQFLMEQKVPAALLGV ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC PPEHMPSTWGDLQRFLARARDGFATGYQAREIIDPFSRGSYPPGSVLGDLPTLKRQAAMW CHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCHHHCCCCCCCHHHCCCHHHHHHHHHH LIRAIADMAILTMNDEERALLAIDRRPKLRSQAAIRLSLRALSRYLRSEKGTLAFEGFVK HHHHHHHHHEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH ANTAKIMRRAFEVDRKPGRRAREKAFRVPDAAGFVVQLPDLVHNWPGSRSIAEQPKPVEG HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCCHHCCCCCCCC PSAHETRAGAGRARRAG CCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA