| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314764
Identifier: 158314764
GI number: 158314764
Start: 3466550
End: 3468064
Strand: Direct
Name: 158314764
Synonym: Franean1_2946
Alternate gene names: NA
Gene position: 3466550-3468064 (Clockwise)
Preceding gene: 158314763
Following gene: 158314765
Centisome position: 38.59
GC content: 66.73
Gene sequence:
>1515_bases GTGACCATCGCGGCGGCTTCCACCGCAACGCCCCAGGTCATCGTGATCGGTGCCGGCTTCGGCGGCATGTCGGTCGCGCT GGAGCTCAAGGCCTGCGGCATCGACACGTTCACCGTGCTGGAACGCGCCCCCGAGGTGGGCGGTGTGTGGCAGGCGAACG ACTATCCGGGGGCGGCCTGCGACGTTCCGAGTGTTATCTACCAGTTCTCGAGCCACCTCAAGGCCAACTGGTCGCGGCGC TTCGGTTCACAGGCGGAGATCCGTGACTATGTCCGGCAGGTGTCGATCGAGAGCGGGGTACGGCCGCACATCCGTTTCGG TACCGAGGTGGTCTCCGCCAGCTTCGGCGAGTCGACGAACCGGTGGACTGTCGAGCTCGCCGACGGCGAGCAGCTCTCCG CGGATGTCCTGGTCGCCGCCACGGGCCAGTTGAGCCGGCCCAGAACTCCGCAGATCGAAGGGCGGGACACGTTCACCGGC GCACAGTTCCACTCCGCCGAGTGGGACCACTCTGTCGACCTACGTGGCCGGCGGGTGACGGTCGTCGGTGGTGGCGCCAG CACGATCCAGGTCGTTCCGGCCATCGTGGACACGGCCGCCCACACCACGTTGATCCAGCGTTCGCCCAGCTGGGTGGTCG GCAAGTACGACTGGTCGCCGGGTCCGCTTGAGCGGAGCCTCTCTCGGGTGCCGGGCTTTCTGCGCCTTTACCACGGCGCC ATGTGGCAGTGGTTCGAGGCCAAGTATCCCTTCGTCCTACGCCGATACGACGCAGGACGGACACTCTACGAGGCGTTCTG GCGCAGGCGGATTCGCGCGGCCCTGAAGGACGAGCAGAAGATCGCCGCCTGCCTGCCCGACTACCGCATTGGCTGTGCCC GCATCCTGCTCTCCAAGGCCTGGTACCCCACCCTCGCCCGGGAGGACGTGTCGGTCTTCCGGGACGGCGTGACCGTCATG ACCGAGGACGGCGTCCTCACCTCCGACGGGCGGCACATTCCAACGGACGTCGTCATCTGGTGCACCGGTTTCACCGCGAC CGAGTACCTCGCGCCGATTCGCGTTACTGGGCGTGGCGGGCTCGACCTGCACACAGTCTGGAAGGACGGTCCCGAGGCGT ACCTCGGCCTGGCGGTTCCGGGATTCCCGAACTTCTTCATGTCCTACGGCCCGAACACGGGCTCTCTGACGAACACCATC ACCAGCATGCTCGAGTACCAGGCGAGTTACATTCGGCAGGCGATCGAGCACATCGGGCGGAGCCGCCTGGCCTATTCGGT TCGACAGGACGTCCACGATTCCTTCAACGCCGAGCTGGGGCGCCGTCTACCGCAGACCGTCTTCAGTACCGGCTGCCCCG GCTGGTACGCAACACCCAGCGGAAAAATCACGACAGTGTGGGTGGGCTCACACCGGGAGTACCGCCGCCGCACCCGGTTC TTCGACCCCACCGTCTACGACGAGGCGGTCCCGGCCCCCACGTGGTCGACGCCCGACGTCTCCCTCACGCAGTGA
Upstream 100 bases:
>100_bases TGCTCCTTCTCCACCAATGGGGAGAAGCCGGTCCCCTCGCCTCGTCTCCGTCAGCCAGCCCCGGCGTGGGCACCGACACC TGCGTCTCGAGGAGCGTTTC
Downstream 100 bases:
>100_bases CGCTACATCGGTTCCGCTCTGCAGAAGAGGTTTTGACATGACCGACCACACCTCAACCATCGAACCCACCGCTGCGCCGC GGACGCTGACCGTCCCGACA
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MTIAAASTATPQVIVIGAGFGGMSVALELKACGIDTFTVLERAPEVGGVWQANDYPGAACDVPSVIYQFSSHLKANWSRR FGSQAEIRDYVRQVSIESGVRPHIRFGTEVVSASFGESTNRWTVELADGEQLSADVLVAATGQLSRPRTPQIEGRDTFTG AQFHSAEWDHSVDLRGRRVTVVGGGASTIQVVPAIVDTAAHTTLIQRSPSWVVGKYDWSPGPLERSLSRVPGFLRLYHGA MWQWFEAKYPFVLRRYDAGRTLYEAFWRRRIRAALKDEQKIAACLPDYRIGCARILLSKAWYPTLAREDVSVFRDGVTVM TEDGVLTSDGRHIPTDVVIWCTGFTATEYLAPIRVTGRGGLDLHTVWKDGPEAYLGLAVPGFPNFFMSYGPNTGSLTNTI TSMLEYQASYIRQAIEHIGRSRLAYSVRQDVHDSFNAELGRRLPQTVFSTGCPGWYATPSGKITTVWVGSHREYRRRTRF FDPTVYDEAVPAPTWSTPDVSLTQ
Sequences:
>Translated_504_residues MTIAAASTATPQVIVIGAGFGGMSVALELKACGIDTFTVLERAPEVGGVWQANDYPGAACDVPSVIYQFSSHLKANWSRR FGSQAEIRDYVRQVSIESGVRPHIRFGTEVVSASFGESTNRWTVELADGEQLSADVLVAATGQLSRPRTPQIEGRDTFTG AQFHSAEWDHSVDLRGRRVTVVGGGASTIQVVPAIVDTAAHTTLIQRSPSWVVGKYDWSPGPLERSLSRVPGFLRLYHGA MWQWFEAKYPFVLRRYDAGRTLYEAFWRRRIRAALKDEQKIAACLPDYRIGCARILLSKAWYPTLAREDVSVFRDGVTVM TEDGVLTSDGRHIPTDVVIWCTGFTATEYLAPIRVTGRGGLDLHTVWKDGPEAYLGLAVPGFPNFFMSYGPNTGSLTNTI TSMLEYQASYIRQAIEHIGRSRLAYSVRQDVHDSFNAELGRRLPQTVFSTGCPGWYATPSGKITTVWVGSHREYRRRTRF FDPTVYDEAVPAPTWSTPDVSLTQ >Mature_503_residues TIAAASTATPQVIVIGAGFGGMSVALELKACGIDTFTVLERAPEVGGVWQANDYPGAACDVPSVIYQFSSHLKANWSRRF GSQAEIRDYVRQVSIESGVRPHIRFGTEVVSASFGESTNRWTVELADGEQLSADVLVAATGQLSRPRTPQIEGRDTFTGA QFHSAEWDHSVDLRGRRVTVVGGGASTIQVVPAIVDTAAHTTLIQRSPSWVVGKYDWSPGPLERSLSRVPGFLRLYHGAM WQWFEAKYPFVLRRYDAGRTLYEAFWRRRIRAALKDEQKIAACLPDYRIGCARILLSKAWYPTLAREDVSVFRDGVTVMT EDGVLTSDGRHIPTDVVIWCTGFTATEYLAPIRVTGRGGLDLHTVWKDGPEAYLGLAVPGFPNFFMSYGPNTGSLTNTIT SMLEYQASYIRQAIEHIGRSRLAYSVRQDVHDSFNAELGRRLPQTVFSTGCPGWYATPSGKITTVWVGSHREYRRRTRFF DPTVYDEAVPAPTWSTPDVSLTQ
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI50541965, Length=227, Percent_Identity=26.8722466960352, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI50541961, Length=227, Percent_Identity=26.8722466960352, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI4503757, Length=224, Percent_Identity=25.8928571428571, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI4503759, Length=227, Percent_Identity=26.431718061674, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25145785, Length=351, Percent_Identity=23.0769230769231, Blast_Score=90, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 55862; Mature: 55730
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAAASTATPQVIVIGAGFGGMSVALELKACGIDTFTVLERAPEVGGVWQANDYPGAAC CEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCCCC DVPSVIYQFSSHLKANWSRRFGSQAEIRDYVRQVSIESGVRPHIRFGTEVVSASFGESTN CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC RWTVELADGEQLSADVLVAATGQLSRPRTPQIEGRDTFTGAQFHSAEWDHSVDLRGRRVT EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEE VVGGGASTIQVVPAIVDTAAHTTLIQRSPSWVVGKYDWSPGPLERSLSRVPGFLRLYHGA EEECCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHH MWQWFEAKYPFVLRRYDAGRTLYEAFWRRRIRAALKDEQKIAACLPDYRIGCARILLSKA HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHC WYPTLAREDVSVFRDGVTVMTEDGVLTSDGRHIPTDVVIWCTGFTATEYLAPIRVTGRGG CCCHHHHHHHHHHHCCCEEEECCCEEECCCCCCCCCEEEEEECCCHHHHCCEEEEECCCC LDLHTVWKDGPEAYLGLAVPGFPNFFMSYGPNTGSLTNTITSMLEYQASYIRQAIEHIGR CEEEEEECCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRLAYSVRQDVHDSFNAELGRRLPQTVFSTGCPGWYATPSGKITTVWVGSHREYRRRTRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCHHHHHHHCC FDPTVYDEAVPAPTWSTPDVSLTQ CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TIAAASTATPQVIVIGAGFGGMSVALELKACGIDTFTVLERAPEVGGVWQANDYPGAAC EEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCCCC DVPSVIYQFSSHLKANWSRRFGSQAEIRDYVRQVSIESGVRPHIRFGTEVVSASFGESTN CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC RWTVELADGEQLSADVLVAATGQLSRPRTPQIEGRDTFTGAQFHSAEWDHSVDLRGRRVT EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEE VVGGGASTIQVVPAIVDTAAHTTLIQRSPSWVVGKYDWSPGPLERSLSRVPGFLRLYHGA EEECCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHH MWQWFEAKYPFVLRRYDAGRTLYEAFWRRRIRAALKDEQKIAACLPDYRIGCARILLSKA HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHC WYPTLAREDVSVFRDGVTVMTEDGVLTSDGRHIPTDVVIWCTGFTATEYLAPIRVTGRGG CCCHHHHHHHHHHHCCCEEEECCCEEECCCCCCCCCEEEEEECCCHHHHCCEEEEECCCC LDLHTVWKDGPEAYLGLAVPGFPNFFMSYGPNTGSLTNTITSMLEYQASYIRQAIEHIGR CEEEEEECCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRLAYSVRQDVHDSFNAELGRRLPQTVFSTGCPGWYATPSGKITTVWVGSHREYRRRTRF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCHHHHHHHCC FDPTVYDEAVPAPTWSTPDVSLTQ CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]