| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314755
Identifier: 158314755
GI number: 158314755
Start: 3453633
End: 3454619
Strand: Direct
Name: 158314755
Synonym: Franean1_2937
Alternate gene names: NA
Gene position: 3453633-3454619 (Clockwise)
Preceding gene: 158314751
Following gene: 158314757
Centisome position: 38.45
GC content: 67.07
Gene sequence:
>987_bases ATGACGGAGCCTTTGGAGATTGACGATCTCGATCGGGGGATCGTCGAGCGGCTTCGAGTGGACGGTCGGGACACGAACCG TTCGATCGCGAGCAGCCTTGGGGTCGGGGAGGCCACCGTGGCGGCGCGCCTGCGACGTCTCGAGGCCGCCAATGCCGTCC ACGTCGTCGCGCTGACCGACATGCACCGGATGGGCTTGGAGTGGTTCGCCTTCCTGCTCATCCGAGTCAGTGGACGGCCT GTGCTCGAGGTCGCCTCCGATCTTTCGGCCATCGACCAGGCGATCTTTGTGAACATCCATTCCGGACGGTTCGACATGAT CTGCGGCGTGCTTGCACGCAGCCGCGCGGAGCTCGCCCGCGTGGTCGGTGAGGTCGTGCCGCGGGTGGACGGCGTCGTCT CCGTCCGCTGCGAACTCGCGGCCGACGTGCTGCGGTTCGACTCGTCCTGGGCTGCGTTGGTCGACGGCCCCGGGCGTGGC GTGTTCCGTGGTCCGGAGATTCCCATCGGGGCCGTCGACAGCCTCGACCTGCGCATCATCGAGTGTCTGCAGCGCGACGC CCGCAGTAGCAACCGGATGATCGCCACGGAGCTCGACGTGTCCGAGGGCACGGTGCGGACCCGCCTCCGTCGGATGGAGT CCGAGGGTCTCGTGCGCATCCGCGCCGTCAGCGACATCCACGCGTTCGGGATCAGCGCGGCGGCGCTCGTCGGGCTCCAC GTCGCTGGGGGCGAGGTGGCCGCGGTACAGCAGGCGCTGGAGGGCGTCGCCGGCCTTGTGGCGATCATTCGCTGCCTGGG GGAGTTCGACTACATGCTCATCGTCCTCGCCCGTGACCGTGCAGCCCTCATACAGACGGTGGTCGGCCAGCTCCAGCCGA TGAAGTGCTTGCGGTCCGTCGAGACGTTCGAGTACGTCACCACAGTAAAACACCTCTACACATGGGTCCGGCTTGTCACG GACGACGAAGTTGGTGAGACCCGGTAG
Upstream 100 bases:
>100_bases CGGACCGCCACCGTCCACACTGATGACCGAGATCGCTGTACGAGTTGGCGGCGTGACGTTCCGCTCATACGTCGACTTTG CTGAGCGATATGGTCGTGCC
Downstream 100 bases:
>100_bases TGCCTCCCAGGGCCGCAGCCGTCAGTAGACCTGCGGATCCGGCCCGCCTCCGTCGACGACGATCCGCTGGCCGGTGACGT ACCCGGCGCCCGGCCCGAGC
Product: AsnC family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTEPLEIDDLDRGIVERLRVDGRDTNRSIASSLGVGEATVAARLRRLEAANAVHVVALTDMHRMGLEWFAFLLIRVSGRP VLEVASDLSAIDQAIFVNIHSGRFDMICGVLARSRAELARVVGEVVPRVDGVVSVRCELAADVLRFDSSWAALVDGPGRG VFRGPEIPIGAVDSLDLRIIECLQRDARSSNRMIATELDVSEGTVRTRLRRMESEGLVRIRAVSDIHAFGISAAALVGLH VAGGEVAAVQQALEGVAGLVAIIRCLGEFDYMLIVLARDRAALIQTVVGQLQPMKCLRSVETFEYVTTVKHLYTWVRLVT DDEVGETR
Sequences:
>Translated_328_residues MTEPLEIDDLDRGIVERLRVDGRDTNRSIASSLGVGEATVAARLRRLEAANAVHVVALTDMHRMGLEWFAFLLIRVSGRP VLEVASDLSAIDQAIFVNIHSGRFDMICGVLARSRAELARVVGEVVPRVDGVVSVRCELAADVLRFDSSWAALVDGPGRG VFRGPEIPIGAVDSLDLRIIECLQRDARSSNRMIATELDVSEGTVRTRLRRMESEGLVRIRAVSDIHAFGISAAALVGLH VAGGEVAAVQQALEGVAGLVAIIRCLGEFDYMLIVLARDRAALIQTVVGQLQPMKCLRSVETFEYVTTVKHLYTWVRLVT DDEVGETR >Mature_327_residues TEPLEIDDLDRGIVERLRVDGRDTNRSIASSLGVGEATVAARLRRLEAANAVHVVALTDMHRMGLEWFAFLLIRVSGRPV LEVASDLSAIDQAIFVNIHSGRFDMICGVLARSRAELARVVGEVVPRVDGVVSVRCELAADVLRFDSSWAALVDGPGRGV FRGPEIPIGAVDSLDLRIIECLQRDARSSNRMIATELDVSEGTVRTRLRRMESEGLVRIRAVSDIHAFGISAAALVGLHV AGGEVAAVQQALEGVAGLVAIIRCLGEFDYMLIVLARDRAALIQTVVGQLQPMKCLRSVETFEYVTTVKHLYTWVRLVTD DEVGETR
Specific function: Unknown
COG id: COG1522
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35792; Mature: 35661
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS50956 HTH_ASNC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPLEIDDLDRGIVERLRVDGRDTNRSIASSLGVGEATVAARLRRLEAANAVHVVALTD CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEHH MHRMGLEWFAFLLIRVSGRPVLEVASDLSAIDQAIFVNIHSGRFDMICGVLARSRAELAR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHH VVGEVVPRVDGVVSVRCELAADVLRFDSSWAALVDGPGRGVFRGPEIPIGAVDSLDLRII HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH ECLQRDARSSNRMIATELDVSEGTVRTRLRRMESEGLVRIRAVSDIHAFGISAAALVGLH HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHH VAGGEVAAVQQALEGVAGLVAIIRCLGEFDYMLIVLARDRAALIQTVVGQLQPMKCLRSV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHH ETFEYVTTVKHLYTWVRLVTDDEVGETR HHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TEPLEIDDLDRGIVERLRVDGRDTNRSIASSLGVGEATVAARLRRLEAANAVHVVALTD CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEHH MHRMGLEWFAFLLIRVSGRPVLEVASDLSAIDQAIFVNIHSGRFDMICGVLARSRAELAR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHH VVGEVVPRVDGVVSVRCELAADVLRFDSSWAALVDGPGRGVFRGPEIPIGAVDSLDLRII HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH ECLQRDARSSNRMIATELDVSEGTVRTRLRRMESEGLVRIRAVSDIHAFGISAAALVGLH HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHH VAGGEVAAVQQALEGVAGLVAIIRCLGEFDYMLIVLARDRAALIQTVVGQLQPMKCLRSV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHH ETFEYVTTVKHLYTWVRLVTDDEVGETR HHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA