| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158314757
Identifier: 158314757
GI number: 158314757
Start: 3455783
End: 3456631
Strand: Direct
Name: 158314757
Synonym: Franean1_2939
Alternate gene names: NA
Gene position: 3455783-3456631 (Clockwise)
Preceding gene: 158314755
Following gene: 158314758
Centisome position: 38.47
GC content: 67.96
Gene sequence:
>849_bases ATGGAGATCATCCGGCCGGTCGACCTCCAGGCCCCGCACGCCGCGTATCTGACCTTCTACATCGTGTTCGTCCTCAGTGC GTTAGCGACGACGGCCCTCATCGCGCAGCGGGCCGTCAAGCTCAGATCCCTGCTGCCGCTGGCAGCTCTCGCCGGGGGTG CCGCGATCGGCATCGTGATGCCCCCCATCCTCAATGTCCTCACCCTCGTGTGGTTCCCCTCGAACATCCCGGGCACAGCC GTCACCGCCTTCGGGATGCGCGACCCAGTGTTCGACGCCATCGGGTACGCGCTGTTCATCGGGTTCGGCGGATGGGTGTT CTGCGAGCAGCTCACGGCCGGTCGCGGCAGGCGGGCCCTGGTGGAGACGTTCCTCGTGTGGGGAGTCAGCGACCTAATCA TCGAACTGCCCTTCCTCCACTGGGGTATGTACACCTATTACGGGTCGCAGCCCTTGACCGTCATGGGTTTTCCGCTCCAC TGGGTCCTCATGAACGGGCTCGTCCCGGTGATCTCCGGCTACACGATGTACCTCGTGACGGCGCACTGGCCCGCGGGGAA GGCCGGCGCACCGTGGCGGGTCCTTGTGTGTCCCGCGCTCGCTGCCGGCGTCCTCTTCATCCCGGTGGCGCCGGTGGCGA CCGCGCTCAACGCACAGATCTCCGACTGGGTGCGCGTCGCGGCTGCCCTCGTGAGCATGGTGATGTCGCTGGCGATCCTG CGCTGGATCGCGCGCAACCTCCCCGGCCCGGTGGGGCCGACGGTGCTGGGAACCGCTGAGGTGGTGGGCAACCACCGGCC CAGCAGTGCGTCCCTGGCGTCAGCCCGCCCGCGGGACCCTGTGTCGTAG
Upstream 100 bases:
>100_bases GACGGTCCTCACCTCGTGCGACAGGATCACAGGGGAGCCGGTCGCGGCTCTCCCGACCATGGCGCCGGGCCAGGCCCCGC GCGTCGCCGAGGGCTGAGCG
Downstream 100 bases:
>100_bases AGATCGGCGGCATCGGTTGTCCGCGCCGAAGATCTGAGCCCGCCCACGAGCATCTGCGATCTGCCGCACGACAGCGTTCG CCTACCCCTCGGTGCCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MEIIRPVDLQAPHAAYLTFYIVFVLSALATTALIAQRAVKLRSLLPLAALAGGAAIGIVMPPILNVLTLVWFPSNIPGTA VTAFGMRDPVFDAIGYALFIGFGGWVFCEQLTAGRGRRALVETFLVWGVSDLIIELPFLHWGMYTYYGSQPLTVMGFPLH WVLMNGLVPVISGYTMYLVTAHWPAGKAGAPWRVLVCPALAAGVLFIPVAPVATALNAQISDWVRVAAALVSMVMSLAIL RWIARNLPGPVGPTVLGTAEVVGNHRPSSASLASARPRDPVS
Sequences:
>Translated_282_residues MEIIRPVDLQAPHAAYLTFYIVFVLSALATTALIAQRAVKLRSLLPLAALAGGAAIGIVMPPILNVLTLVWFPSNIPGTA VTAFGMRDPVFDAIGYALFIGFGGWVFCEQLTAGRGRRALVETFLVWGVSDLIIELPFLHWGMYTYYGSQPLTVMGFPLH WVLMNGLVPVISGYTMYLVTAHWPAGKAGAPWRVLVCPALAAGVLFIPVAPVATALNAQISDWVRVAAALVSMVMSLAIL RWIARNLPGPVGPTVLGTAEVVGNHRPSSASLASARPRDPVS >Mature_282_residues MEIIRPVDLQAPHAAYLTFYIVFVLSALATTALIAQRAVKLRSLLPLAALAGGAAIGIVMPPILNVLTLVWFPSNIPGTA VTAFGMRDPVFDAIGYALFIGFGGWVFCEQLTAGRGRRALVETFLVWGVSDLIIELPFLHWGMYTYYGSQPLTVMGFPLH WVLMNGLVPVISGYTMYLVTAHWPAGKAGAPWRVLVCPALAAGVLFIPVAPVATALNAQISDWVRVAAALVSMVMSLAIL RWIARNLPGPVGPTVLGTAEVVGNHRPSSASLASARPRDPVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30110; Mature: 30110
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIRPVDLQAPHAAYLTFYIVFVLSALATTALIAQRAVKLRSLLPLAALAGGAAIGIVM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH PPILNVLTLVWFPSNIPGTAVTAFGMRDPVFDAIGYALFIGFGGWVFCEQLTAGRGRRAL HHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH VETFLVWGVSDLIIELPFLHWGMYTYYGSQPLTVMGFPLHWVLMNGLVPVISGYTMYLVT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCEEEEEE AHWPAGKAGAPWRVLVCPALAAGVLFIPVAPVATALNAQISDWVRVAAALVSMVMSLAIL EECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWIARNLPGPVGPTVLGTAEVVGNHRPSSASLASARPRDPVS HHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEIIRPVDLQAPHAAYLTFYIVFVLSALATTALIAQRAVKLRSLLPLAALAGGAAIGIVM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH PPILNVLTLVWFPSNIPGTAVTAFGMRDPVFDAIGYALFIGFGGWVFCEQLTAGRGRRAL HHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHH VETFLVWGVSDLIIELPFLHWGMYTYYGSQPLTVMGFPLHWVLMNGLVPVISGYTMYLVT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCEEEEEE AHWPAGKAGAPWRVLVCPALAAGVLFIPVAPVATALNAQISDWVRVAAALVSMVMSLAIL EECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWIARNLPGPVGPTVLGTAEVVGNHRPSSASLASARPRDPVS HHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA