Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314735

Identifier: 158314735

GI number: 158314735

Start: 3433355

End: 3434005

Strand: Direct

Name: 158314735

Synonym: Franean1_2916

Alternate gene names: NA

Gene position: 3433355-3434005 (Clockwise)

Preceding gene: 158314733

Following gene: 158314740

Centisome position: 38.22

GC content: 63.59

Gene sequence:

>651_bases
ATGGCACAGCTGACCCGGGCAGAGATCATCGATGCCGCGGTCGAGCTTCTCGATCAGGGCGTCGAGGCGCTCACCATGCG
GTCGCTGGCGGATCGACTGAGCGTGACGGCGGCGGCGCTTTACTACTGGTTCCCAGCGAAGGCTCAGCTGCTGGACGCAA
TCGCGGAGCACGTCGCCGCGCAGATCGTCGCGACGAAGGAGCGCGGCGCGTCATGGGAGGACAGACTGCGATCTCTCGCG
ATGGCTGTTTTCGATGCCGCGGAGCATCACCCGGCTACCTTCAACTGGGTCTTCCGTAATTATGCGATGCAGCCTCCACT
GGCTAAGATCGACGAGGCCATGCTGGACGTTCTGATGGACGCGGGCTTCGGTGCCCGAGAGGCGGTGTTGGCCAAGAGTA
CAATCCTTCGACTCGTCGTCGGTCACCTCGGGCTAGTCGTCCTACCGAACCACATAGACCCGTCCAGCGTGGATGTGGAG
TCCTATCCCCGTGCCCATCAAGTCGCGAGCGCGAGCGCTCAGCTCTCGCCCGGCGACTTCCTGGAATATGGGCTCGACCA
CGTCATCGCCAGTTTTGGATCGCCGCGCCGGGGCCGCCAGGGAGATTCTCCCTCGGGCTCTCGCACCAGCTCTGCGAACG
GGCAAATCTGA

Upstream 100 bases:

>100_bases
ACGCCCTCGGTGCTACTGGGGGCGAGGCGGCTCATGCGGAAGGGCGACAGGTCCCGGCTGCCCGCCGGTAGCGACGACTC
TGTGAGCTAGGGTTCCGGAC

Downstream 100 bases:

>100_bases
GCCCCCGCGTCCCCGTGGCGCAGTCCGTCGGTGGAGGACGCCCACGGGGATAGCGGTTAGTGGTCCACTGAAGGGGCGTA
GGCGCGCATCATGGCGCCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MAQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAAQIVATKERGASWEDRLRSLA
MAVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMDAGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVE
SYPRAHQVASASAQLSPGDFLEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI

Sequences:

>Translated_216_residues
MAQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAAQIVATKERGASWEDRLRSLA
MAVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMDAGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVE
SYPRAHQVASASAQLSPGDFLEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI
>Mature_215_residues
AQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAAQIVATKERGASWEDRLRSLAM
AVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMDAGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVES
YPRAHQVASASAQLSPGDFLEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23293; Mature: 23161

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QIVATKERGASWEDRLRSLAMAVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVESYPRAHQVASASAQLSPGDF
CCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHCCHHHHHHHCCCCCCCHHH
LEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AQLTRAEIIDAAVELLDQGVEALTMRSLADRLSVTAAALYYWFPAKAQLLDAIAEHVAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QIVATKERGASWEDRLRSLAMAVFDAAEHHPATFNWVFRNYAMQPPLAKIDEAMLDVLMD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AGFGAREAVLAKSTILRLVVGHLGLVVLPNHIDPSSVDVESYPRAHQVASASAQLSPGDF
CCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHCCHHHHHHHCCCCCCCHHH
LEYGLDHVIASFGSPRRGRQGDSPSGSRTSSANGQI
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA