| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314733
Identifier: 158314733
GI number: 158314733
Start: 3431770
End: 3432339
Strand: Direct
Name: 158314733
Synonym: Franean1_2914
Alternate gene names: NA
Gene position: 3431770-3432339 (Clockwise)
Preceding gene: 158314724
Following gene: 158314735
Centisome position: 38.21
GC content: 67.02
Gene sequence:
>570_bases ATGAACGCTGGTATGGACGAGCCCGAATCGGCACTTGCGCCGACCGTAGCGTCCACGCTTTCCCACCTCGCGAACTTGAA CAACTTCGATCCATTGGCGGGGCACCCACGGCTGCGGGCATTCTTCGAATGCTGGCTGGACACGTTCGTCTTCAACGGGA GCATCGAGGCCGGCCTGCGCGAACGGGCGATCCTGCGGGTGATGTGGCGATGCGCCCGTCCGTTCGAGTGGGGTAACCAC TACTGGCTCGCCCGTGCGGCCGGCCTGTCCGACGAGGAGATCCTCGCGGTGCGTACAGCGGACCCGGAACGGAACCTCGC CGATGCTGTCGCTCAGGTGGTGCGGGCCGCCGACGAGGTCGTCGACCTCGGATACCTCACTCCCGAGACCATGGCTGCGT GCCGGGAGCTCTTCCCGGACGTCGGTCAGCTCCACGAGTTCCTGTACCTCATCGCCGGCTACCGCATGATGGCCACCGTC TCGGCCTCAACCAGGCACCAGCATCGAGGGCGCGAGCGCCGGGGACACCAGTGGCCCCCGGACGGCATCGGGCCGATCCC GACGCCCTAA
Upstream 100 bases:
>100_bases CGGCGCACGTGAGTGGCAAAGTAGCCGACGCCAAGAACCCTGTGCTCGGCTCGGGTGGCAGGTGTCTGTCGAGGGTGCTG CTTCTGGAGAGTGGTGACTG
Downstream 100 bases:
>100_bases CCGATTCACGGTGATCTCTGGACTACTTCGGGGGGAACCGTAGTGCGCCGTCGAGCCGGATGTTCTCCCCGTTGAGGTAG GGGTTGCGCGCGATTGCCTC
Product: carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNAGMDEPESALAPTVASTLSHLANLNNFDPLAGHPRLRAFFECWLDTFVFNGSIEAGLRERAILRVMWRCARPFEWGNH YWLARAAGLSDEEILAVRTADPERNLADAVAQVVRAADEVVDLGYLTPETMAACRELFPDVGQLHEFLYLIAGYRMMATV SASTRHQHRGRERRGHQWPPDGIGPIPTP
Sequences:
>Translated_189_residues MNAGMDEPESALAPTVASTLSHLANLNNFDPLAGHPRLRAFFECWLDTFVFNGSIEAGLRERAILRVMWRCARPFEWGNH YWLARAAGLSDEEILAVRTADPERNLADAVAQVVRAADEVVDLGYLTPETMAACRELFPDVGQLHEFLYLIAGYRMMATV SASTRHQHRGRERRGHQWPPDGIGPIPTP >Mature_189_residues MNAGMDEPESALAPTVASTLSHLANLNNFDPLAGHPRLRAFFECWLDTFVFNGSIEAGLRERAILRVMWRCARPFEWGNH YWLARAAGLSDEEILAVRTADPERNLADAVAQVVRAADEVVDLGYLTPETMAACRELFPDVGQLHEFLYLIAGYRMMATV SASTRHQHRGRERRGHQWPPDGIGPIPTP
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21137; Mature: 21137
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGMDEPESALAPTVASTLSHLANLNNFDPLAGHPRLRAFFECWLDTFVFNGSIEAGLR CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH ERAILRVMWRCARPFEWGNHYWLARAAGLSDEEILAVRTADPERNLADAVAQVVRAADEV HHHHHHHHHHHCCCCCCCCEEEEHECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH VDLGYLTPETMAACRELFPDVGQLHEFLYLIAGYRMMATVSASTRHQHRGRERRGHQWPP HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGIGPIPTP CCCCCCCCC >Mature Secondary Structure MNAGMDEPESALAPTVASTLSHLANLNNFDPLAGHPRLRAFFECWLDTFVFNGSIEAGLR CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH ERAILRVMWRCARPFEWGNHYWLARAAGLSDEEILAVRTADPERNLADAVAQVVRAADEV HHHHHHHHHHHCCCCCCCCEEEEHECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH VDLGYLTPETMAACRELFPDVGQLHEFLYLIAGYRMMATVSASTRHQHRGRERRGHQWPP HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DGIGPIPTP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA