| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314610
Identifier: 158314610
GI number: 158314610
Start: 3298230
End: 3299057
Strand: Direct
Name: 158314610
Synonym: Franean1_2789
Alternate gene names: NA
Gene position: 3298230-3299057 (Clockwise)
Preceding gene: 158314609
Following gene: 158314612
Centisome position: 36.72
GC content: 70.05
Gene sequence:
>828_bases ATGTGTCTGCAAGCCCGCGCACGACGCGACGAGGCCAGCCGAGAACACCGCGCCCGCGAGGCCGCCGCCCGGGAAGCCGC CGGCATCCCCCCTCCACAACCGGTCACCACGGTGGAACCCGACCCGCCGGTGTGCACCGGGGACTGCATCTCCGAAGCCG CCGCCTGGGACAGAGCCCATCCAGGGCAGTTCCACGACCACAGCGACGGCGCGATGATGTCGTGCGCCACCTGCCACGGC GACGTCTGCTTCTCGTGCGGCCACGCGCCGGTGCCCGGGACAGGGATGATCTGTGACCGGTGCGGCGAGGCGGACGCGGC CGCACTGGCGGCTGACGCCGACTGGGAACCGCCATCCGACCCGCGCGATGACCTCAACCGGCTCATCGGCCGCATCGTGC ACACCGGCAACCTGACCTACGCCACCGTTCACGCCCGGGTCAACAAAACGATGGGCGTAGCGCGGCGCCGAGAAGCCGAC CCTCAGGCAATCCAGGAAGGCATCGCCTTCGCCCACGCCTGGCTGGAGGCGCTGGCCTGCGAGGAACCGGACCCGATCGG GGACACCCGGGACGATCCGTCCACCGGCATCGCAGCCCCGACCGGCAGGGCACCACGGCTTCGCATCATCCCCATGCCCG CCTCCGGTCCCAGATGGCAGGCACAACTCGACCTCATCCGCGCGAGCGGGGCGATTTACGATGTCCAGAGCCGACTCTGG TGGCTGTCGCTGAGCACAGCCGAGCCGGGCTGGGCCGCGTTGCAGACGCTGTTCACTGCCGCCCGCGAACACCAGACTCA GATCATCGTGGAGATGTTCCCGCCCTGA
Upstream 100 bases:
>100_bases GCCCGGACAACGCCAAGGCCTCGGACAACCGGATCTCGACTGGCCGGACCTCCCCAGGTCGGTGGCCTGCTGGACACATC TAACCGACGCCGAAAGAGAG
Downstream 100 bases:
>100_bases CGGAGAGCAGGCGGTCGCGGATCAGCTGGCGCTGGAGGGAACCACAGCCACGAACTCGGCCCCCTTGTGGTTGGCCACGA TCAGCGCGAAACGATGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MCLQARARRDEASREHRAREAAAREAAGIPPPQPVTTVEPDPPVCTGDCISEAAAWDRAHPGQFHDHSDGAMMSCATCHG DVCFSCGHAPVPGTGMICDRCGEADAAALAADADWEPPSDPRDDLNRLIGRIVHTGNLTYATVHARVNKTMGVARRREAD PQAIQEGIAFAHAWLEALACEEPDPIGDTRDDPSTGIAAPTGRAPRLRIIPMPASGPRWQAQLDLIRASGAIYDVQSRLW WLSLSTAEPGWAALQTLFTAAREHQTQIIVEMFPP
Sequences:
>Translated_275_residues MCLQARARRDEASREHRAREAAAREAAGIPPPQPVTTVEPDPPVCTGDCISEAAAWDRAHPGQFHDHSDGAMMSCATCHG DVCFSCGHAPVPGTGMICDRCGEADAAALAADADWEPPSDPRDDLNRLIGRIVHTGNLTYATVHARVNKTMGVARRREAD PQAIQEGIAFAHAWLEALACEEPDPIGDTRDDPSTGIAAPTGRAPRLRIIPMPASGPRWQAQLDLIRASGAIYDVQSRLW WLSLSTAEPGWAALQTLFTAAREHQTQIIVEMFPP >Mature_275_residues MCLQARARRDEASREHRAREAAAREAAGIPPPQPVTTVEPDPPVCTGDCISEAAAWDRAHPGQFHDHSDGAMMSCATCHG DVCFSCGHAPVPGTGMICDRCGEADAAALAADADWEPPSDPRDDLNRLIGRIVHTGNLTYATVHARVNKTMGVARRREAD PQAIQEGIAFAHAWLEALACEEPDPIGDTRDDPSTGIAAPTGRAPRLRIIPMPASGPRWQAQLDLIRASGAIYDVQSRLW WLSLSTAEPGWAALQTLFTAAREHQTQIIVEMFPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29674; Mature: 29674
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLQARARRDEASREHRAREAAAREAAGIPPPQPVTTVEPDPPVCTGDCISEAAAWDRAH CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC PGQFHDHSDGAMMSCATCHGDVCFSCGHAPVPGTGMICDRCGEADAAALAADADWEPPSD CCCCCCCCCCCEEEEHHHCCCHHEECCCCCCCCCCHHHHHCCCCCHHHEECCCCCCCCCC PRDDLNRLIGRIVHTGNLTYATVHARVNKTMGVARRREADPQAIQEGIAFAHAWLEALAC CHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC EEPDPIGDTRDDPSTGIAAPTGRAPRLRIIPMPASGPRWQAQLDLIRASGAIYDVQSRLW CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCEE WLSLSTAEPGWAALQTLFTAAREHQTQIIVEMFPP EEEECCCCCHHHHHHHHHHHHHHHCEEEEEEECCC >Mature Secondary Structure MCLQARARRDEASREHRAREAAAREAAGIPPPQPVTTVEPDPPVCTGDCISEAAAWDRAH CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC PGQFHDHSDGAMMSCATCHGDVCFSCGHAPVPGTGMICDRCGEADAAALAADADWEPPSD CCCCCCCCCCCEEEEHHHCCCHHEECCCCCCCCCCHHHHHCCCCCHHHEECCCCCCCCCC PRDDLNRLIGRIVHTGNLTYATVHARVNKTMGVARRREADPQAIQEGIAFAHAWLEALAC CHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC EEPDPIGDTRDDPSTGIAAPTGRAPRLRIIPMPASGPRWQAQLDLIRASGAIYDVQSRLW CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCEE WLSLSTAEPGWAALQTLFTAAREHQTQIIVEMFPP EEEECCCCCHHHHHHHHHHHHHHHCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA