| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314609
Identifier: 158314609
GI number: 158314609
Start: 3297202
End: 3298068
Strand: Direct
Name: 158314609
Synonym: Franean1_2788
Alternate gene names: NA
Gene position: 3297202-3298068 (Clockwise)
Preceding gene: 158314608
Following gene: 158314610
Centisome position: 36.71
GC content: 72.09
Gene sequence:
>867_bases ATGAGCCAGCAGGAGGAGCCGTCCGGGTTCGCCGCGGTGACCGTGGTTCTGCTGACGGTCGAGGAGTTTCCAGGCGAGCT CGCCGATGACTATCCGGCGGCCTGCGCTGCCCTCGATCTGCCCGTCACGTATGACGGGTACGCACTGCTTCTCGGTCAGG ACACCATCGGCGCCCGATGGACCCAGGTCAGCACGGACACCGACGCCGCCCGCAGCGCCCTGGCCCTGTGGGACACCGGC TTGCAGAGCGGGATCTCCACCAACCCCAAGCGCCTGCTCGCCTACCGGCCGGGCTGGCCCATCGAATGCCACCTGGCCCT CGCGGATCGGACGGACCCGCATGATCCGACCGGGGCGGAGACGTCGCTGCGACCACCGCAGATGACCGCCTGGCCCGGCG CAGAACGCCGCCGCGCCGCCGACCGTCTCGCCAGCGACCTGGAAGACCTGATCGTCGACGACGACACCGGCTTTGACGAG CCCCACCTGCGCCTGCACGACATCCTGCCCAGGCTCGCCGACCTGGACCATCCCGCCGTCACACAGGCCCTCAGCGCCGC CTGGCGACTCGCCACCGACTCGGCCCCCGCCCCAGGAAGCGTGCGGTCCCGCCGCGCCGCACCTGGCCCGGCACGGCTTC TGCGCGCCAGCGCGGACGGCTGGAGCCTGGTGGGCCGCACCGACAACCCGGTCCTGCTCCTGACAGACCAGCTCCCCGCC ATCGCAGCAGACCTCACCGGCACAGACCGACTCGCCGAACTCCTCGACGCCCTGGACGCAGCCGCAACCCGGGCCGTCAT CCCCTCGCCACCGCCCGCCTCGCCGAGGCGGCGGGGCCAGCCAGGACGCACCAGATCACAGACGTGA
Upstream 100 bases:
>100_bases ATCTCAACTACCTGGACTGCTACTCCTGTTCCCGCCGCCCCAAGGCTTTGGCCTGTGGGCTCTGCGCAGCCCCGAGGACG ATCCTGATGAGGAGACCGCC
Downstream 100 bases:
>100_bases CCGTGAAGTGCACACGTCCTCGGCGCGACGGCCAACGCTGCCAGCGGGACGCCGCGGAATGGCCCGGACAACGCCAAGGC CTCGGACAACCGGATCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSQQEEPSGFAAVTVVLLTVEEFPGELADDYPAACAALDLPVTYDGYALLLGQDTIGARWTQVSTDTDAARSALALWDTG LQSGISTNPKRLLAYRPGWPIECHLALADRTDPHDPTGAETSLRPPQMTAWPGAERRRAADRLASDLEDLIVDDDTGFDE PHLRLHDILPRLADLDHPAVTQALSAAWRLATDSAPAPGSVRSRRAAPGPARLLRASADGWSLVGRTDNPVLLLTDQLPA IAADLTGTDRLAELLDALDAAATRAVIPSPPPASPRRRGQPGRTRSQT
Sequences:
>Translated_288_residues MSQQEEPSGFAAVTVVLLTVEEFPGELADDYPAACAALDLPVTYDGYALLLGQDTIGARWTQVSTDTDAARSALALWDTG LQSGISTNPKRLLAYRPGWPIECHLALADRTDPHDPTGAETSLRPPQMTAWPGAERRRAADRLASDLEDLIVDDDTGFDE PHLRLHDILPRLADLDHPAVTQALSAAWRLATDSAPAPGSVRSRRAAPGPARLLRASADGWSLVGRTDNPVLLLTDQLPA IAADLTGTDRLAELLDALDAAATRAVIPSPPPASPRRRGQPGRTRSQT >Mature_287_residues SQQEEPSGFAAVTVVLLTVEEFPGELADDYPAACAALDLPVTYDGYALLLGQDTIGARWTQVSTDTDAARSALALWDTGL QSGISTNPKRLLAYRPGWPIECHLALADRTDPHDPTGAETSLRPPQMTAWPGAERRRAADRLASDLEDLIVDDDTGFDEP HLRLHDILPRLADLDHPAVTQALSAAWRLATDSAPAPGSVRSRRAAPGPARLLRASADGWSLVGRTDNPVLLLTDQLPAI AADLTGTDRLAELLDALDAAATRAVIPSPPPASPRRRGQPGRTRSQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30776; Mature: 30644
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQEEPSGFAAVTVVLLTVEEFPGELADDYPAACAALDLPVTYDGYALLLGQDTIGARW CCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHEECCCEEECCEEEEEECCCCCCEE TQVSTDTDAARSALALWDTGLQSGISTNPKRLLAYRPGWPIECHLALADRTDPHDPTGAE EEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC TSLRPPQMTAWPGAERRRAADRLASDLEDLIVDDDTGFDEPHLRLHDILPRLADLDHPAV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHHH TQALSAAWRLATDSAPAPGSVRSRRAAPGPARLLRASADGWSLVGRTDNPVLLLTDQLPA HHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHEECCCCCEEECCCCCCEEEEECCCCH IAADLTGTDRLAELLDALDAAATRAVIPSPPPASPRRRGQPGRTRSQT HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQQEEPSGFAAVTVVLLTVEEFPGELADDYPAACAALDLPVTYDGYALLLGQDTIGARW CCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHEECCCEEECCEEEEEECCCCCCEE TQVSTDTDAARSALALWDTGLQSGISTNPKRLLAYRPGWPIECHLALADRTDPHDPTGAE EEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC TSLRPPQMTAWPGAERRRAADRLASDLEDLIVDDDTGFDEPHLRLHDILPRLADLDHPAV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHHH TQALSAAWRLATDSAPAPGSVRSRRAAPGPARLLRASADGWSLVGRTDNPVLLLTDQLPA HHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHEECCCCCEEECCCCCCEEEEECCCCH IAADLTGTDRLAELLDALDAAATRAVIPSPPPASPRRRGQPGRTRSQT HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA