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The map label for this gene is iap [H]

Identifier: 158314574

GI number: 158314574

Start: 3254627

End: 3255199

Strand: Direct

Name: iap [H]

Synonym: Franean1_2750

Alternate gene names: 158314574

Gene position: 3254627-3255199 (Clockwise)

Preceding gene: 158314573

Following gene: 158314575

Centisome position: 36.23

GC content: 65.62

Gene sequence:

>573_bases
GTGTCGGCCGACAAGTACCGCTCGATCGGCGGCGGCTTCGGGTCCGACACCGCCCCGTCCGACGCCGGCTACGCCGCCGT
CATCTACGCCCAAGGCCAGCTCGGCATCCCCTACCTGTGGGGTGGGGACGGCCCGGCCGAAGGCGGCTTCGACTGCTCCG
GGCTCACCAGGGCCGCCTACCTCGCCGCCGGGATCGACCTGCCCCGCACCGCGCAGACCCAGTACGAGGCCGGCCCCGTG
GTCCCACCTGGAGAACCGCTCCAGATCGGAGACCTCGTCTACTACGGCACCGCCACCAACATCCACCACGTCGCGATCTA
CATCGGCAACGGGCAGATGATCACCGCGCCGGGAGACAACAAGGTCGTCAGGATCGCCTTGTACAGGTGGAAGGAGATGA
CTATTTCGGAGCGACAAGGCCGGGAAAACGAGCTTTATTCGAACCAGATGCAACATCCGACGAGCGGCGATAAGCGACCA
AGCCGGGCTTTCGGGGCGTCCAACTTCGAGCGTATCGTGACACGTCGCCCTCCGACGATCAACCGCGGACGCCGATGTTC
GATGCAACGATGA

Upstream 100 bases:

>100_bases
CACGACTCTACTGAATGATCCAACTTTGCAGTGGGTCCGCAAGATGGCGCCCTGAAGATTTCAGCGTCCAAGTCACCGCG
CTGGCTGGCTGAAGTGTTAG

Downstream 100 bases:

>100_bases
CGCATCGGATGCAACAGGAAGCTGCGGTAGCGCAACGTGCCGATCTGCCCGGCGCTGCGCACCTTGTGCTTGACGCAACG
GTTGCACATTTCGATCCTGA

Product: NLP/P60 protein

Products: NA

Alternate protein names: Invasion-associated protein [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSADKYRSIGGGFGSDTAPSDAGYAAVIYAQGQLGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQTQYEAGPV
VPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGDNKVVRIALYRWKEMTISERQGRENELYSNQMQHPTSGDKRP
SRAFGASNFERIVTRRPPTINRGRRCSMQR

Sequences:

>Translated_190_residues
MSADKYRSIGGGFGSDTAPSDAGYAAVIYAQGQLGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQTQYEAGPV
VPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGDNKVVRIALYRWKEMTISERQGRENELYSNQMQHPTSGDKRP
SRAFGASNFERIVTRRPPTINRGRRCSMQR
>Mature_189_residues
SADKYRSIGGGFGSDTAPSDAGYAAVIYAQGQLGIPYLWGGDGPAEGGFDCSGLTRAAYLAAGIDLPRTAQTQYEAGPVV
PPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGDNKVVRIALYRWKEMTISERQGRENELYSNQMQHPTSGDKRPS
RAFGASNFERIVTRRPPTINRGRRCSMQR

Specific function: This major extracellular protein may be involved in the invasion of non-professional phagocytic cells by Listeria [H]

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=100, Percent_Identity=41, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1786421, Length=123, Percent_Identity=34.1463414634146, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR003646
- InterPro:   IPR013247 [H]

Pfam domain/function: PF01476 LysM; PF00877 NLPC_P60; PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 20600; Mature: 20469

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADKYRSIGGGFGSDTAPSDAGYAAVIYAQGQLGIPYLWGGDGPAEGGFDCSGLTRAAY
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHH
LAAGIDLPRTAQTQYEAGPVVPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGDN
HHHCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCEEEEEEEECCCEEEEECCCC
KVVRIALYRWKEMTISERQGRENELYSNQMQHPTSGDKRPSRAFGASNFERIVTRRPPTI
CEEEEEEEECCCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
NRGRRCSMQR
CCCCCCCCCC
>Mature Secondary Structure 
SADKYRSIGGGFGSDTAPSDAGYAAVIYAQGQLGIPYLWGGDGPAEGGFDCSGLTRAAY
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHH
LAAGIDLPRTAQTQYEAGPVVPPGEPLQIGDLVYYGTATNIHHVAIYIGNGQMITAPGDN
HHHCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCEEEEEEEECCCEEEEECCCC
KVVRIALYRWKEMTISERQGRENELYSNQMQHPTSGDKRPSRAFGASNFERIVTRRPPTI
CEEEEEEEECCCCCCHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
NRGRRCSMQR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1514809; 1459966 [H]