| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is yhbW [C]
Identifier: 158314537
GI number: 158314537
Start: 3209706
End: 3210785
Strand: Direct
Name: yhbW [C]
Synonym: Franean1_2713
Alternate gene names: 158314537
Gene position: 3209706-3210785 (Clockwise)
Preceding gene: 158314534
Following gene: 158314538
Centisome position: 35.73
GC content: 71.11
Gene sequence:
>1080_bases GTGGGCCTGGCGGCCCGAAACTCGAAATTGACATCGAAGTTGCAAACGGGCTATGGTCCGCGCGTGTCAGTGTCGAATGT TGCGCTCGGGCTCAGCCTTGCCGGAATCCGTGGGGACGCGGCGTCGCTCGCCGATGTCGCGCGGCGAGCCGAACGGTCGG GATACGACTCCGTGTGGACGAGCGAGGCGTGGGGGAGCGACGCGTTCACGCCGCTGGCCTACATCGCCGCGCTCACCAGT CGCCTCAGGCTCGGCACCGCCATCGCGCAGATGCCGGCGCGGACCCCGGCGACGACGGCGATGACGGTGCTGACGCTGCA GCAGCTGTCCCAGGGGCGCGTCCTGCTCGGGCTCGGCGCGTCGGGGCCACAGGTCGTCGAGGGGTGGCACGGCGTGCCCT ACCGCCCTCCGGTGCGGATGACGCGCGAGTACCTGGCCGTGTTGCGCAAGGCACTGGCCGCGACCGAGCGGCTCGAGTTC TCCGGTGCGATCTTCACGGTTCCCTACACCGGCCCGGACTCCACCGGGCAGGGGCGTCCGTTGCGCTCCACCCTGCCGGG GGCTGCGGACACTCCCATCCTCATCGCCGCCCTAGGGCCGAAGAACGTCGCCATGGCGGTGGAGGAGGCCGACGGCCTGC TCCCGTACCTGTGGAGCCCGGCGCGCTGGAGCAAGGCCTGGGGGGAGACCCTCGAGAAGGCACCCGAGGGATTCCAGGTG GCACCCACGGTCCTCGCCTGCGTCGGCGACGACCTCGACGCCTGCCGTAACCAGGTGCGCCCCCGTATCGCGCTGCACAT CGGGGGCATGGGCTCCAGGTCGAAGAACTTCTACGCCTTGCTGGTCTCCCGCTACGGGTACGCCGACGAGGCCAGCCGCA TCCAGGACCTCTACCTGGGTGGGGACCGCGCGGCGGCCTGCGCCGCCGTTCCCGACGAGCTCGTCGACGATCTGGCGCTC GTGGGTCCGCCCGCCCGGATCGCCGACCAGCTCGCGGTGTGGCGGGACGGGCCGATCACCACCCTGATCGTGGAGCCGAC GGACCTGGCCATGGTGGAGCCCATCGCCAGCCTGTGGTGA
Upstream 100 bases:
>100_bases AGATTGACATTCGTGACGATAGCGGCCTCGGGTCACCGGGACAATCGGACCGTTTCCGCTGTGGGGAGTGCTGGTTTGAC GGGGTGCGGCCGGCGCGGGG
Downstream 100 bases:
>100_bases CGGTCGCCTCCGTACCCGATCTCCACGTCGACATGGGCACAGCAGCCGACCGGCGCCACGATGGTCACCTACACCGGCAA GGTCCTCAACTACGTTCCCG
Product: luciferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MGLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWTSEAWGSDAFTPLAYIAALTS RLRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGASGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEF SGAIFTVPYTGPDSTGQGRPLRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQV APTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLGGDRAAACAAVPDELVDDLAL VGPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW
Sequences:
>Translated_359_residues MGLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWTSEAWGSDAFTPLAYIAALTS RLRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGASGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEF SGAIFTVPYTGPDSTGQGRPLRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQV APTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLGGDRAAACAAVPDELVDDLAL VGPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW >Mature_358_residues GLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWTSEAWGSDAFTPLAYIAALTSR LRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGASGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEFS GAIFTVPYTGPDSTGQGRPLRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQVA PTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLGGDRAAACAAVPDELVDDLALV GPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019919 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 38079; Mature: 37948
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWT CCCCCCCHHHHHHHHCCCCCCEEHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC SEAWGSDAFTPLAYIAALTSRLRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECC SGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEFSGAIFTVPYTGPDSTGQGRP CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCCCCC LRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQV CHHHCCCCCCCCEEEEEECCCCEEEEEHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEE APTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLG HHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC GDRAAACAAVPDELVDDLALVGPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW CCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure GLAARNSKLTSKLQTGYGPRVSVSNVALGLSLAGIRGDAASLADVARRAERSGYDSVWT CCCCCCHHHHHHHHCCCCCCEEHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC SEAWGSDAFTPLAYIAALTSRLRLGTAIAQMPARTPATTAMTVLTLQQLSQGRVLLGLGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECC SGPQVVEGWHGVPYRPPVRMTREYLAVLRKALAATERLEFSGAIFTVPYTGPDSTGQGRP CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCCCCCCCCCC LRSTLPGAADTPILIAALGPKNVAMAVEEADGLLPYLWSPARWSKAWGETLEKAPEGFQV CHHHCCCCCCCCEEEEEECCCCEEEEEHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCEE APTVLACVGDDLDACRNQVRPRIALHIGGMGSRSKNFYALLVSRYGYADEASRIQDLYLG HHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC GDRAAACAAVPDELVDDLALVGPPARIADQLAVWRDGPITTLIVEPTDLAMVEPIASLW CCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]