| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is echA8 [H]
Identifier: 158314533
GI number: 158314533
Start: 3205256
End: 3206050
Strand: Direct
Name: echA8 [H]
Synonym: Franean1_2709
Alternate gene names: 158314533
Gene position: 3205256-3206050 (Clockwise)
Preceding gene: 158314532
Following gene: 158314534
Centisome position: 35.69
GC content: 68.68
Gene sequence:
>795_bases GTGAATGTTCTCTACGAGGTCGCCGGCAGGGTCGCGACCATCACTCTGAACCGGCCCGAGGCCGCCAACGCCCAGAGCAT GGAGCTGCTCGACGAACTCGACGCAGCCTGGACGCGAGCGGCGGCGGACGACGCAGTGGCCGTCGTCGTCCTGCGCGGTG CCGGCCGGCACTTCTCCGCCGGGCATGACCTGAAGGGTTCCGGGGCGAAGCACGCCAAGCCGACTCTCGAGACGATCTAC CGGTTCGAGGCGAGGCGCTATCTGGAGTACTCGTTGCGCTGGCGGAACATACCGAAGCCGTCGATCGCGGCGGTGCAGGG CCGTTGCATCGCCGGCGGGCTGCTGCTGTGCTGGCCGTGCGATCTGATCATCGCCGCCGAGGACGCGCTGTTCTCCGACC CGGTGGTGGCGATGGGGATCGGTGGTGTCGAGTACCACGGGCACACCTGGGAGCTGGGGCCGCGCAAGGCCAAGGAGATC CTGTTCACCGGCCGTCCGCTGACCGCGGCGGAGGCGGAACGGGTCGGCATGGTGAACAGGGTGGTGCCGCGCGAGGAGCT GGAGGCCACGACGCGGGCGCTCGCCGAGCAGATCGCCGCGATGCCGGCCTTCGGGCTGCGCCAGGCCAAGCGTGCGGTGA ACCAGACCCTGGACGTGCAGGGTTTCTACGCGGCGATCCAGTCGGTGTTCGACGTCCACCAGACCGGGCATGGCAACGCG CTCAGCGTCAGCGGTCTCCCGATCCTGGTGGACCTGGACCAGATGAAGGCGAAGGTCAAGACGGAGCTGCTCTAG
Upstream 100 bases:
>100_bases GCGGTCGAGGGCCACCTGCCGGGCCCGATACACCAGGGCCCGGACCGGCACCGTCTCCGACCTCGCGTCCCCGCATCCCT CTGCCGACTGAGGAGTCGCC
Downstream 100 bases:
>100_bases CAGGCGACTGCCGTAAATATCGACATCGAGCTCGATATCGACTATCGTCGCGGCGGGTACGTGGCGGGTAAGGAAGGATC GCGAACATGCGGGAGAGCGA
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MNVLYEVAGRVATITLNRPEAANAQSMELLDELDAAWTRAAADDAVAVVVLRGAGRHFSAGHDLKGSGAKHAKPTLETIY RFEARRYLEYSLRWRNIPKPSIAAVQGRCIAGGLLLCWPCDLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEI LFTGRPLTAAEAERVGMVNRVVPREELEATTRALAEQIAAMPAFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA LSVSGLPILVDLDQMKAKVKTELL
Sequences:
>Translated_264_residues MNVLYEVAGRVATITLNRPEAANAQSMELLDELDAAWTRAAADDAVAVVVLRGAGRHFSAGHDLKGSGAKHAKPTLETIY RFEARRYLEYSLRWRNIPKPSIAAVQGRCIAGGLLLCWPCDLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEI LFTGRPLTAAEAERVGMVNRVVPREELEATTRALAEQIAAMPAFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA LSVSGLPILVDLDQMKAKVKTELL >Mature_264_residues MNVLYEVAGRVATITLNRPEAANAQSMELLDELDAAWTRAAADDAVAVVVLRGAGRHFSAGHDLKGSGAKHAKPTLETIY RFEARRYLEYSLRWRNIPKPSIAAVQGRCIAGGLLLCWPCDLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEI LFTGRPLTAAEAERVGMVNRVVPREELEATTRALAEQIAAMPAFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA LSVSGLPILVDLDQMKAKVKTELL
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=213, Percent_Identity=32.3943661971831, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI31542718, Length=226, Percent_Identity=29.2035398230088, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI70995211, Length=189, Percent_Identity=31.7460317460317, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI45643119, Length=208, Percent_Identity=28.3653846153846, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI260275230, Length=208, Percent_Identity=28.3653846153846, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI260274832, Length=208, Percent_Identity=28.3653846153846, Blast_Score=78, Evalue=7e-15, Organism=Escherichia coli, GI1788597, Length=213, Percent_Identity=33.8028169014084, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787659, Length=218, Percent_Identity=33.4862385321101, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787660, Length=226, Percent_Identity=34.070796460177, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI221142681, Length=228, Percent_Identity=32.8947368421053, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87082183, Length=202, Percent_Identity=32.6732673267327, Blast_Score=79, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25145438, Length=219, Percent_Identity=35.6164383561644, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17554946, Length=214, Percent_Identity=31.7757009345794, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17535521, Length=210, Percent_Identity=25.7142857142857, Blast_Score=80, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17534483, Length=233, Percent_Identity=27.4678111587983, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17549921, Length=217, Percent_Identity=25.3456221198157, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536985, Length=231, Percent_Identity=25.5411255411255, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17558304, Length=240, Percent_Identity=28.3333333333333, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17540306, Length=196, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17560910, Length=220, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17540714, Length=237, Percent_Identity=26.5822784810127, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI20129971, Length=216, Percent_Identity=33.7962962962963, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24653477, Length=216, Percent_Identity=33.7962962962963, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI21357171, Length=236, Percent_Identity=29.2372881355932, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24650670, Length=230, Percent_Identity=31.304347826087, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24654903, Length=214, Percent_Identity=28.0373831775701, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24653139, Length=218, Percent_Identity=33.4862385321101, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI19922422, Length=199, Percent_Identity=28.1407035175879, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI19920382, Length=222, Percent_Identity=28.3783783783784, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 28650; Mature: 28650
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLYEVAGRVATITLNRPEAANAQSMELLDELDAAWTRAAADDAVAVVVLRGAGRHFSA CCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC GHDLKGSGAKHAKPTLETIYRFEARRYLEYSLRWRNIPKPSIAAVQGRCIAGGLLLCWPC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHCCCEEEEECC DLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEILFTGRPLTAAEAERVGMVNR CEEEEECCHHCCCCCCEEECCCEEECCCEECCCCHHHHHHEECCCCCCHHHHHHHHHHHH VVPREELEATTRALAEQIAAMPAFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCE LSVSGLPILVDLDQMKAKVKTELL EEECCCEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MNVLYEVAGRVATITLNRPEAANAQSMELLDELDAAWTRAAADDAVAVVVLRGAGRHFSA CCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC GHDLKGSGAKHAKPTLETIYRFEARRYLEYSLRWRNIPKPSIAAVQGRCIAGGLLLCWPC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHCCCEEEEECC DLIIAAEDALFSDPVVAMGIGGVEYHGHTWELGPRKAKEILFTGRPLTAAEAERVGMVNR CEEEEECCHHCCCCCCEEECCCEEECCCEECCCCHHHHHHEECCCCCCHHHHHHHHHHHH VVPREELEATTRALAEQIAAMPAFGLRQAKRAVNQTLDVQGFYAAIQSVFDVHQTGHGNA CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCE LSVSGLPILVDLDQMKAKVKTELL EEECCCEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]