| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314521
Identifier: 158314521
GI number: 158314521
Start: 3191499
End: 3192797
Strand: Direct
Name: 158314521
Synonym: Franean1_2697
Alternate gene names: NA
Gene position: 3191499-3192797 (Clockwise)
Preceding gene: 158314520
Following gene: 158314523
Centisome position: 35.53
GC content: 67.9
Gene sequence:
>1299_bases ATGTATGACACGGTAGTCCTACACGGTCATTCGACGGCGAGGCGGCACCGCCGACGCTCGGCGGGCATGCTCTTATCGGC GTCCCTGGCGCTGCTCGTGTTAGCCGCGGCGTGCGGTTCGGATGACGGCGGGAGCACGCCCACCACGGTGGATTCATCCG CGGCCGCCGACGCGCTCGGTCCGGTCAGGAAGGCGGCGGGAACCCCCGTCAAGATCGGTATCGTCTCGGACGGCAGGTCC GCCGCGATCGACAACTCGGTGCAGTTCGCGGTAGCGAAGGCGACCGCGAAATACCTGAACGAGCATCGCGGGGGGATCGG TGGTCGGCCCGTCGAGCTTGTGACGTGTGAGACGCAGGCGGACCCGGCCAAGGGCACGGACTGCGGCAACCAGATGGTCG AGAAGGACGTCGTCGCGGTCGCGGTCAGTGAGTCGGCGGTCGGTGACAGCGTCTGGCAGCCGCTGGCCGACGCTGATGTG CCGGCGATGTTATACAGCGCGACCAGCCCGACGGCCCTCACCGACCCGACGACCTTCACGGTGACCGATCCGAGTTTCAC GATTCAGCAGCTGCCGATCGCCCTCGCGAAGGAGAAGAAGCTCAAGAAGGTGACGTTGGTGGCCATCGACGTGCCCGCCT TGCTCTACAGCGTCCAGGAGGTCGTGCCGAAGCAGATGGCGAAGGCAGGGCTCGACTACCAGCTCATCCGTATCCCACCG GGCACAGCCGACATGACGCCGCAGCTGCAGGGTGTCGCGGGCGGTGACCCAGGGTTGGTGTTCGTCATCGGCAACGACTC GTTCTGTATCAGCGCCTTCAACGGCCTGAGGGCGGTCGGGTACGACGGCAGCATCGGCGCGATCTCGCAGTGCATCACCG ACGCGACCCGCAAGGCGGTGCCGGGCGACGTGCTGGACGGCATGAGCGTCGCCGCCTCGATGCCGGCCGGCGGGGATGAC CCGTCCAGCGTCCTCTACAACGCCGTGCTCGAGACCTACGGCAAGGACATCGATGCCAGTTCGTCCACCGGTCGGGGCAT GTTCGCCACCTTCGCGGGCCTCGCGGCAGCGCTTGAGGGCATCAAGGGCGACGTCACCCCGGCGACGGCCGTGGCCGCCA TCAGATCGATGCCGGAGAAGGAGCTGCCGGGCGCGGGCGGGCTGAAGTTCCGCTGCAACGGCAAGGCCAACCCCGAGACG CCCGCGGTGTGCGTGCGGGGCGGACTGACGGCGAGCCTCGACAGCGACGGCCAGGCCACCGACTTCAACGTGGTCGGGAG CTCTCCGATCCCGGACTGA
Upstream 100 bases:
>100_bases TGGGCGGCGGCCGGCCGACGGGCGTGGTTGCCGTACTCAGCTCGAATGGCCCGCTGTGGCGAATGGTCCTGCGGGCAGAC AACTGTGAGGTATGAAGATT
Downstream 100 bases:
>100_bases CCGAGCCGCGGGCACGCTGGCCGCGGGCAGGAGTTCTCCTCCTACCTGGCCTCCTGGTAGGAGGAGAAGGCCCGCGGACG GCTCTGCCGCCTACCGATCA
Product: putative branched-chain amino acid ABC transporter, amino acid-binding protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Transport System; Lipoprotein; Amino Acid ABC Transporter
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MYDTVVLHGHSTARRHRRRSAGMLLSASLALLVLAAACGSDDGGSTPTTVDSSAAADALGPVRKAAGTPVKIGIVSDGRS AAIDNSVQFAVAKATAKYLNEHRGGIGGRPVELVTCETQADPAKGTDCGNQMVEKDVVAVAVSESAVGDSVWQPLADADV PAMLYSATSPTALTDPTTFTVTDPSFTIQQLPIALAKEKKLKKVTLVAIDVPALLYSVQEVVPKQMAKAGLDYQLIRIPP GTADMTPQLQGVAGGDPGLVFVIGNDSFCISAFNGLRAVGYDGSIGAISQCITDATRKAVPGDVLDGMSVAASMPAGGDD PSSVLYNAVLETYGKDIDASSSTGRGMFATFAGLAAALEGIKGDVTPATAVAAIRSMPEKELPGAGGLKFRCNGKANPET PAVCVRGGLTASLDSDGQATDFNVVGSSPIPD
Sequences:
>Translated_432_residues MYDTVVLHGHSTARRHRRRSAGMLLSASLALLVLAAACGSDDGGSTPTTVDSSAAADALGPVRKAAGTPVKIGIVSDGRS AAIDNSVQFAVAKATAKYLNEHRGGIGGRPVELVTCETQADPAKGTDCGNQMVEKDVVAVAVSESAVGDSVWQPLADADV PAMLYSATSPTALTDPTTFTVTDPSFTIQQLPIALAKEKKLKKVTLVAIDVPALLYSVQEVVPKQMAKAGLDYQLIRIPP GTADMTPQLQGVAGGDPGLVFVIGNDSFCISAFNGLRAVGYDGSIGAISQCITDATRKAVPGDVLDGMSVAASMPAGGDD PSSVLYNAVLETYGKDIDASSSTGRGMFATFAGLAAALEGIKGDVTPATAVAAIRSMPEKELPGAGGLKFRCNGKANPET PAVCVRGGLTASLDSDGQATDFNVVGSSPIPD >Mature_432_residues MYDTVVLHGHSTARRHRRRSAGMLLSASLALLVLAAACGSDDGGSTPTTVDSSAAADALGPVRKAAGTPVKIGIVSDGRS AAIDNSVQFAVAKATAKYLNEHRGGIGGRPVELVTCETQADPAKGTDCGNQMVEKDVVAVAVSESAVGDSVWQPLADADV PAMLYSATSPTALTDPTTFTVTDPSFTIQQLPIALAKEKKLKKVTLVAIDVPALLYSVQEVVPKQMAKAGLDYQLIRIPP GTADMTPQLQGVAGGDPGLVFVIGNDSFCISAFNGLRAVGYDGSIGAISQCITDATRKAVPGDVLDGMSVAASMPAGGDD PSSVLYNAVLETYGKDIDASSSTGRGMFATFAGLAAALEGIKGDVTPATAVAAIRSMPEKELPGAGGLKFRCNGKANPET PAVCVRGGLTASLDSDGQATDFNVVGSSPIPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43994; Mature: 43994
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDTVVLHGHSTARRHRRRSAGMLLSASLALLVLAAACGSDDGGSTPTTVDSSAAADALG CCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH PVRKAAGTPVKIGIVSDGRSAAIDNSVQFAVAKATAKYLNEHRGGIGGRPVELVTCETQA HHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC DPAKGTDCGNQMVEKDVVAVAVSESAVGDSVWQPLADADVPAMLYSATSPTALTDPTTFT CCCCCCCHHHHHHHHCEEEEEECCHHCCHHHHHHHCCCCCCEEEEECCCCCEECCCCEEE VTDPSFTIQQLPIALAKEKKLKKVTLVAIDVPALLYSVQEVVPKQMAKAGLDYQLIRIPP EECCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GTADMTPQLQGVAGGDPGLVFVIGNDSFCISAFNGLRAVGYDGSIGAISQCITDATRKAV CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHCC PGDVLDGMSVAASMPAGGDDPSSVLYNAVLETYGKDIDASSSTGRGMFATFAGLAAALEG CCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH IKGDVTPATAVAAIRSMPEKELPGAGGLKFRCNGKANPETPAVCVRGGLTASLDSDGQAT CCCCCCHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCCCEEEEECCEEEECCCCCCCC DFNVVGSSPIPD EEEEECCCCCCC >Mature Secondary Structure MYDTVVLHGHSTARRHRRRSAGMLLSASLALLVLAAACGSDDGGSTPTTVDSSAAADALG CCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH PVRKAAGTPVKIGIVSDGRSAAIDNSVQFAVAKATAKYLNEHRGGIGGRPVELVTCETQA HHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC DPAKGTDCGNQMVEKDVVAVAVSESAVGDSVWQPLADADVPAMLYSATSPTALTDPTTFT CCCCCCCHHHHHHHHCEEEEEECCHHCCHHHHHHHCCCCCCEEEEECCCCCEECCCCEEE VTDPSFTIQQLPIALAKEKKLKKVTLVAIDVPALLYSVQEVVPKQMAKAGLDYQLIRIPP EECCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECC GTADMTPQLQGVAGGDPGLVFVIGNDSFCISAFNGLRAVGYDGSIGAISQCITDATRKAV CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHCC PGDVLDGMSVAASMPAGGDDPSSVLYNAVLETYGKDIDASSSTGRGMFATFAGLAAALEG CCHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH IKGDVTPATAVAAIRSMPEKELPGAGGLKFRCNGKANPETPAVCVRGGLTASLDSDGQAT CCCCCCHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCCCEEEEECCEEEECCCCCCCC DFNVVGSSPIPD EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA