| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fabG [H]
Identifier: 158314523
GI number: 158314523
Start: 3193386
End: 3194147
Strand: Direct
Name: fabG [H]
Synonym: Franean1_2699
Alternate gene names: 158314523
Gene position: 3193386-3194147 (Clockwise)
Preceding gene: 158314521
Following gene: 158314524
Centisome position: 35.55
GC content: 68.77
Gene sequence:
>762_bases ATGTCCTCCGCAGTTGCCCGGGTCGCGATCGTCACGGGAGCCGCCCGTGGGATAGGCGCTGCCACGGCCATGCGCCTAGC CGCCGAGGGGATGGCGGTCGCCGCCTTGGACCTGAACGAGTCCGCCGTCAAGAACACGGTCGACGCGATCGCCGTCGCGG GCGGCACCGCGCTGGCGGTGGGAGCCGACGTGACCGATGCCGACCAGGCCATGGCGGCCGTGGAGCGGGTGGCCGGCGAG CTCGGACCCCCCACCGTATTGGTCAACAACGCGGGCATCACCCGCGACAACCTGCTGTTCAGGATGACCGAGACGGATTG GGACCTGGTAGTGGGGGTACACCTGCGCGGTACCTTCCTCATGACCCGTGCGGTGCAGGCACACATGGTCGACTCCCGCT TCGGTCGGATCGTGAATCTTTCCAGCACCTCGGCGCTGGGCAACCGCGGCCAGGCCAACTACGCGGCGGCGAAGGCGGGC CTGCAGGGTTTCACCAAGACCGTGGCAATCGAGCTCGGGAAGTTCGGCGTCACCTGCAACGCGATCGCGCCCGGTCTGAT CGACACCGAGATGACCAGAACCACCGCGGTTCGGCTCGGGGAGTCCTGGGAGGCCTACGCCGCCCGTCGAGCGGCACAGA TCCCAGTGGCCCGGGTCGGCCTCCCCGCTGACATCGCGCACACCGTTTCCTTCCTGGTCAGCGAGGGCGCCGGGTTCGTC TCGGGCCAAGTCCTCTACGTTGCTGGCGGGCCGAAGACCTGA
Upstream 100 bases:
>100_bases GGCTCGACCTCGGCCGTGCCCAGCCACGGCCGCCGTCCTACCCGCCCGGGCATCCGAGGGCTACCTCGTTACAGCGAACT TCTTGAGAAGGGGCACAGAT
Downstream 100 bases:
>100_bases GGTGGAAGCACCGTAGCTCCCTCGAAGAACCGGCGAGCAGAGTAAACGTCAGCGGAGCATGAACACCTCCGTGCGCCCCT GTCGGGTTCTGTCGTCCGTT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSSAVARVAIVTGAARGIGAATAMRLAAEGMAVAALDLNESAVKNTVDAIAVAGGTALAVGADVTDADQAMAAVERVAGE LGPPTVLVNNAGITRDNLLFRMTETDWDLVVGVHLRGTFLMTRAVQAHMVDSRFGRIVNLSSTSALGNRGQANYAAAKAG LQGFTKTVAIELGKFGVTCNAIAPGLIDTEMTRTTAVRLGESWEAYAARRAAQIPVARVGLPADIAHTVSFLVSEGAGFV SGQVLYVAGGPKT
Sequences:
>Translated_253_residues MSSAVARVAIVTGAARGIGAATAMRLAAEGMAVAALDLNESAVKNTVDAIAVAGGTALAVGADVTDADQAMAAVERVAGE LGPPTVLVNNAGITRDNLLFRMTETDWDLVVGVHLRGTFLMTRAVQAHMVDSRFGRIVNLSSTSALGNRGQANYAAAKAG LQGFTKTVAIELGKFGVTCNAIAPGLIDTEMTRTTAVRLGESWEAYAARRAAQIPVARVGLPADIAHTVSFLVSEGAGFV SGQVLYVAGGPKT >Mature_252_residues SSAVARVAIVTGAARGIGAATAMRLAAEGMAVAALDLNESAVKNTVDAIAVAGGTALAVGADVTDADQAMAAVERVAGEL GPPTVLVNNAGITRDNLLFRMTETDWDLVVGVHLRGTFLMTRAVQAHMVDSRFGRIVNLSSTSALGNRGQANYAAAKAGL QGFTKTVAIELGKFGVTCNAIAPGLIDTEMTRTTAVRLGESWEAYAARRAAQIPVARVGLPADIAHTVSFLVSEGAGFVS GQVLYVAGGPKT
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=41.897233201581, Blast_Score=178, Evalue=3e-45, Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=39.8989898989899, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=34.8178137651822, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=31.9066147859922, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=28.8, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI4758504, Length=256, Percent_Identity=32.03125, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI66933014, Length=246, Percent_Identity=30.8943089430894, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=31.3492063492063, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=31.3492063492063, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=29.2490118577075, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI83715985, Length=256, Percent_Identity=30.46875, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=28.8, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI210032110, Length=204, Percent_Identity=26.4705882352941, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4503301, Length=212, Percent_Identity=26.8867924528302, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI31542939, Length=193, Percent_Identity=33.160621761658, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI209862901, Length=195, Percent_Identity=29.2307692307692, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI19923983, Length=195, Percent_Identity=29.2307692307692, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI40254986, Length=186, Percent_Identity=31.7204301075269, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI142976729, Length=212, Percent_Identity=24.0566037735849, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI25282469, Length=226, Percent_Identity=24.3362831858407, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI59889578, Length=198, Percent_Identity=29.7979797979798, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI33667109, Length=202, Percent_Identity=31.1881188118812, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI40807363, Length=190, Percent_Identity=25.2631578947368, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI7706318, Length=194, Percent_Identity=25.2577319587629, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=41.2244897959184, Blast_Score=175, Evalue=2e-45, Organism=Escherichia coli, GI1790717, Length=242, Percent_Identity=34.297520661157, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=30.8880308880309, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=32.520325203252, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI2367175, Length=254, Percent_Identity=34.251968503937, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=32.9317269076305, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=32.1285140562249, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1786812, Length=246, Percent_Identity=30.0813008130081, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=31.8367346938775, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=29.9212598425197, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=28.0632411067194, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=25.6, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=38.4615384615385, Blast_Score=143, Evalue=9e-35, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=35.6275303643725, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17568967, Length=188, Percent_Identity=38.8297872340425, Blast_Score=120, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=31.5789473684211, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=31.3953488372093, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=28.8973384030418, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=30, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=27.6422764227642, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=28.6852589641434, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560150, Length=257, Percent_Identity=30.7392996108949, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17538480, Length=258, Percent_Identity=30.2325581395349, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=28.7449392712551, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=30.2788844621514, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=28.6259541984733, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17531453, Length=258, Percent_Identity=28.6821705426357, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=29.5454545454545, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17551412, Length=258, Percent_Identity=29.4573643410853, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=28.8389513108614, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=29.9242424242424, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=27.3764258555133, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=29.0566037735849, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17560220, Length=258, Percent_Identity=27.906976744186, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=27.843137254902, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=28.8973384030418, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=27.3809523809524, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565030, Length=260, Percent_Identity=30, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17563726, Length=271, Percent_Identity=28.4132841328413, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=29.5719844357977, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17508651, Length=258, Percent_Identity=30.2325581395349, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17561272, Length=227, Percent_Identity=30.3964757709251, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538182, Length=256, Percent_Identity=30.078125, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71982365, Length=196, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17564282, Length=222, Percent_Identity=23.8738738738739, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193203117, Length=188, Percent_Identity=28.1914893617021, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193203115, Length=188, Percent_Identity=28.1914893617021, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17555612, Length=207, Percent_Identity=32.3671497584541, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508895, Length=193, Percent_Identity=24.8704663212435, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71997099, Length=209, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32563809, Length=208, Percent_Identity=25.4807692307692, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17507613, Length=208, Percent_Identity=25.4807692307692, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=196, Percent_Identity=40.3061224489796, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324126, Length=256, Percent_Identity=29.296875, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=42.4, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=36.5853658536585, Blast_Score=123, Evalue=9e-29, Organism=Drosophila melanogaster, GI18859837, Length=188, Percent_Identity=42.0212765957447, Blast_Score=121, Evalue=3e-28, Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=34.5098039215686, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=34.1176470588235, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21355319, Length=263, Percent_Identity=29.277566539924, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=31.2, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI24649181, Length=220, Percent_Identity=29.5454545454545, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=30.859375, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24640492, Length=211, Percent_Identity=27.9620853080569, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24643142, Length=252, Percent_Identity=27.3809523809524, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24644337, Length=230, Percent_Identity=28.2608695652174, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581726, Length=190, Percent_Identity=27.8947368421053, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355631, Length=212, Percent_Identity=25.4716981132075, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=28.2722513089005, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24584748, Length=199, Percent_Identity=28.643216080402, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI281364892, Length=199, Percent_Identity=25.6281407035176, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI161076933, Length=199, Percent_Identity=28.643216080402, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI28573296, Length=223, Percent_Identity=29.5964125560538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI22024069, Length=207, Percent_Identity=31.4009661835749, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24648944, Length=195, Percent_Identity=29.2307692307692, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25853; Mature: 25722
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAVARVAIVTGAARGIGAATAMRLAAEGMAVAALDLNESAVKNTVDAIAVAGGTALAV CCCHHEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCCEEEE GADVTDADQAMAAVERVAGELGPPTVLVNNAGITRDNLLFRMTETDWDLVVGVHLRGTFL CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEECCHHH MTRAVQAHMVDSRFGRIVNLSSTSALGNRGQANYAAAKAGLQGFTKTVAIELGKFGVTCN HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCEEEC AIAPGLIDTEMTRTTAVRLGESWEAYAARRAAQIPVARVGLPADIAHTVSFLVSEGAGFV CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCEE SGQVLYVAGGPKT CCEEEEEECCCCC >Mature Secondary Structure SSAVARVAIVTGAARGIGAATAMRLAAEGMAVAALDLNESAVKNTVDAIAVAGGTALAV CCHHEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCCEEEE GADVTDADQAMAAVERVAGELGPPTVLVNNAGITRDNLLFRMTETDWDLVVGVHLRGTFL CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEECCHHH MTRAVQAHMVDSRFGRIVNLSSTSALGNRGQANYAAAKAGLQGFTKTVAIELGKFGVTCN HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCCCEEEC AIAPGLIDTEMTRTTAVRLGESWEAYAARRAAQIPVARVGLPADIAHTVSFLVSEGAGFV CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCEE SGQVLYVAGGPKT CCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]